HISPID3
Herbarium
Information Standards and Protocols for Interchange of Data
Version 3
Editor
Barry J. Conn
Internet URL
http://www.tdwg.org/standards/110/
� Council of Heads of Australian Herbaria
Previous Versions of HISPID
Version 1:
Croft, J.R. (ed.) (1989). HISPID - Herbarium Information Standards and
Protocols for Interchange of Data (Australian National Botanic Gardens: Canberra).
Version 2:
Whalen, A. (ed.) (1993). HISPID - Herbarium Information Standards and
Protocols for Interchange of Data (National Herbarium of New South Wales: Sydney).
TABLE OF CONTENTS
:
The 'Herbarium Information Standards and Protocols for Interchange of
Data' (HISPID) is a standard format for the interchange of electronic herbarium specimen
information. HISPID has been developed by a committee of representatives from all major
Australian herbaria. This interchange standard was first published in 1989, with a revised
version published in 1993.
HISPID3 is an accession-based interchange standard. Although many fields
refer to attributes of the taxon they should be construed as applying to the specimen
represented by the record, not to the taxon per se. The interchange of taxonomic,
nomenclatural, bibliographic, typification, rare and endangered plant conservation, and
other related information is not dealt with in this standard, unless it specifically
refers to a particular accession (record).
This data dictionary is concerned primarily with data interchange
standards but has considerable relevance to database structure since the task of preparing
interchange files is simplified if the data fields of the despatching and receiving
databases match, as far as possible, the interchange standard. If differences do exist
then, generally, it is easier to combine data fields than it is to dissect them in a
reliable manner. Fields that are concatenated are frequently heterogeneous in their nature
and many preclude the possibility of rearranging the data contained within such fields.
The fields discussed in this data dictionary cover most of the herbarium
and botanic gardens sphere of activity and have been arranged in groups of similar types
of information. In many cases these groups may coincide with separate well�defined tables
(or databases) of structurally similar records.
The challenge for herbarium data managers is to decide whether the data
are to be efficiently exchanged as discrete but related tables (databases) or as a larger
single flat file that may have to be appropriately dismembered by the receiving
institution. Some database packages are able to stack multiple values in a single field.
This useful data structure complicates the interchange format and will not be used at this
stage.
The 'Herbarium Information Systems Committee' (HISCOM) considered
several format options for HISPID3. It was agreed that the interchange format of HISPID3
would be a flat�file. This flat�file format was chosen because it was relatively simple
and required minimal computer programming to enable the importing and exporting of data.
Furthermore, this format was in agreement with that chosen for the 'International Transfer
Format for Botanic Garden Plant Records (Version 2.00)(ITF2). Although, it was recognised
that it was difficult to transfer relational (hierarchical) data in flat�file formats, it
was decided to proceed with the publication of this version of HISPID so that electronic
data interchange could be actively encouraged. It is hoped that future versions of HISPID
will include the capability of transferring data such that the relational structure is
maintained.
There have been several major changes incorporated into this version of
the HISPID transfer format, namely:
(1) HISPID3 allows for the interchange of variable length fields. It is no longer restricted to a fixed length format.
(2) HISPID3 allows missing data to be omitted from the transfer file
(3) HISPID3 provides a protocol for interchanging (non-standard) data that are either not defined within this document or are in a form different to that define here.
(4) Apart from a few exceptions, HISPID3 does not evaluate the relevance of interchanging any of the specific fields described in this document
(5) The references to how data are stored in the major Australian herbarium databases has been deleted from this document
(6) HISPID3 has been developed in conjunction with ITF2 (International
Transfer Format for Botanic Gardens Plant Records version 2.00) so that the two
interchange standards are as compatible as possible.
The transfer format of HISPID3 is based on 'Information technology -
Open Systems Interconnection - Specification of Abstract Syntax Notation One (ASN.1) '.
International Standard ISO/IEC 8824, 2nd ed. (1990)(ISO/IEC: Gen�ve).
As far as practicable, raw data should be used. Interpretations or
corrections in free text fields should be enclosed in square brackets: '[' and ']'.
Omitted data should be represented by the ellipsis: '...'.
Since the printable ASCII (EBDIC or UNICODE) character set does not
include italicised characters, these are not included in the interchange file.
If information is not known for a field, then the field need not be
included in the interchange file or else the field identifier may be interchanged
unfilled. However, if the value of the Collector's Identifier field is unknown,
then the default value should be 's.n.'.
In general, single character (flag) fields have not been included in
this standard because of the difficulty of detecting data entry errors.
As for the 'single character' fields (above), codes are mostly not
included in this standard because of the difficulty of detecting data entry errors.
The fields included in this interchange standard are a compilation from
the following sources:
ABIS Australian Biotaxonomic/Biogeographic Information System
(Australian Biological Resources Study � ABRS)
ICBN International Code of Botanical Nomenclature
(International Association of Plant Taxonomists � IAPT)
ITF International Transfer Format for Botanic Gardens Plant Records
ITFBGPR (Botanic Gardens Conservation International � BGCI)
ITRF International Earth Rotation Service Terrestrial Reference Frame
MFN Minimal Functional Nomenclator, also known as:
DSTI Database Standards for Taxonomic Information
(Taxonomic Database Working Group � TDWG)
PECS Plant Existence and Categorisation Scheme, also known as:
POSS Plant Occurrence and Status Scheme
(World Conservation Monitoring Centre � WCMC Threatened Plants Unit - TPU)
SDTS Spatial Data Transfer Standard
TDWG Taxonomic Database Working Group
TLR Type and Lectotypification Registers
(Taxonomic Database Working Group � TDWG)
WGSUB World Geographical System for Use in Botany
(Taxonomic Database Working Group � TDWG)
XDF Language for the Definition and Exchange of Biological Data Sets
(Taxonomic Database Working Group � TDWG)
a) Each field is prefaced by an unique identifier this refers to the fields which describe the contents of the file, as well as to those which describe the information contained in each record);
b) Each unique identifier must begin with a lowercase letter (a-z) and cannot contain any spaces;
c) A transfer file begins with the file identifier 'startfile';
f) Variable length fields are allowed;
g) Fields can be omitted from the transfer file if there is no information available for that field;
h) Alphanumeric data are enclosed by double quotation marks (");
i) Numeric data are not enclosed by double quotation marks;
j) Each field and each file information is one line long and is terminated by a comma (,);
k) Each transfer file ends with the file identifier 'endfile'.
startfile | |
version | HISPID version |
numrecords | number of records in this file |
datefile | date to which the file refers |
institute | full name of institution supplying information |
contact | contact name |
address | postal address |
phone | telephone number |
fax | fax number |
email address | |
nonstandard | optional field to describe any non-standard fields added to the HISPID3 transfer file |
fileaction | descriptor flag indicating how records of file should be processed |
filedescriptor | descriptor flag indicating the nature of the records included in file |
content | contents of the file and other comments |
{ | start of a record |
insid | the standard 'Index Herbariorum' code for the herbarium to which the plant record refers |
accid | accession number |
... | |
... | |
| | |
| | |
... | |
} | end of record |
{ | start of next record |
insid | |
accid | |
... | |
| | |
| | |
... | |
} | end of next record |
endfile | end of file |
startfile | |
version | "HISPID3", |
numrec | 2, |
datefile | 19951202, |
institute | "National Herbarium of New South Wales (NSW)", |
contact | "Gary Chapple", |
address | "Royal Botanic Gardens, Mrs Macquaries Road, Sydney NSW 2000, Australia", |
phone | 612 92318164, |
fax | 612 92517231, |
"gary@rbgsyd.gov.au", | |
fileaction | "insert", |
filedescriptor | "exchange", |
content | "Herbarium exchange data of various species from NSW to CANB", |
{ | |
insid | "NSW", |
accid | "390839", |
fam | "Loranthaceae", |
gen | "Amyema", |
sp | "pendulum", |
isprk | "subsp.", |
isp | "longifolium", |
vnam | "Wiecek, B.M.", |
vdat | 1995, |
prot | "Wild", |
cou | "AUSTRALIA", |
pru | "NSW", |
sru | "Central W. Slopes", |
loc | "Mount Bolton, Moura", |
latdeg | 33, |
latmin | 15, |
latdir | "S", |
londeg | 148, |
lonmin | 24, |
londir | "E", |
cnam | "Baeuerlen, W.", |
cdat | 190103, |
hab | "On Eucalyptus macrorrhyncha.", |
misc | "Donated by Museum of Applied Arts & Sciences, 1979.", |
} | |
{ | |
insid | "NSW", |
accid | "248836", |
fam | "Asclepiadaceae", |
gen | "Cynanchum", |
sp | "pedunculatum", |
vnam | "Hill, K.D.", |
vdat | 1992, |
prot | "Wild", |
cou | "AUSTRALIA", |
pru | "WA", |
sru | "Fortescue", |
loc | "Mount Lois.", |
alt | 800, |
latdeg | 22, |
latmin | 06, |
latdir | "S", |
londeg | 117, |
lonmin | 44, |
londir | "E", |
geoacy | 0.05, |
hab | "Summit of mountain. Red loam derived from iron-rich shale.", |
cnam | "Wilson, Peter G.", |
cid | "1031", |
cnam2 | "Rowe, R.", |
cdat | 19910911, |
cnot | "Rare. Scrambler. Flowers white; fruit green.", |
} | |
endfile |
The herbarium data fields for information interchange are listed below
in the following format:
The name of the discrete piece of information within the file or within
each record.
The standard codes used as file or field identifiers in the transfer
file.
A short, meaningful�sounding single�word name for the field, proposed
by TDWG.
A general elaboration of the field name.
The existence of this type of data in any other published or proposed
biological standards.
The type of data allowed in this field, the range of values, or
individual allowable values, and capitalisation.
Any other remarks on the use or application of these data and its
relationships to other data. Any conflicts or problems in the application of these data
types.
Additional information to that provided in Comments explaining
the rules applying to these data.
Additional comments to those provided in Comments and Rules.
This group of fields provides information about the file. These fields are required so
that the receiving institution knows what to do with the incoming data.
Description: The beginning of the transfer file has the file
identifier 'startfile' only.
Domain/Range/Values: This field has the value 'startfile' only
(all in lowercase).
Description: The end of the transfer file has the file identifier
'endfile' only.
Domain/Range/Values: This field has the value 'endfile' only (all
in lowercase).
Comments: To be found at the very end of a HISPID3 file
indicating the end of file. The description of this file identifier has been included here
so that it can be considered together with the 'startfile' identifier.
Description: The HISPID Version used in the current HISPID
transfer file.
Domain/Range/Values: Alphanumeric; the version number prefaced by
the acronym 'HISPID' (all in uppercase).
Comments: Although it is expected that the latest version of
HISPID will normally be used for the transfer format, the format of earlier versions are
allowable. The 'HISPID Version August 1993' should be referred to as HISPID2 and the
original version of HISPID (1989) as HISPID1. This current version should be referred to
as HISPID3.
Description: The total number of records expressed as an integer.
Domain/Range/Values: Integer only.
Description: The date of compilation of the current HISPID file.
Domain/Range/Values: Integer; year (4 digits) followed by month
(2 digits) and then day (2 digits), without spaces between each. That is, YYYYMMDD. For
example, the 6th July 1987 would be transferred in the form 19870706 (refer Collection
Date for further details).
Comments: This date format consists of year month day in that
order.
Description: The name in full of the institution sending the
current HISPID file.
Description: The full name of the contact person within the
institution.
Description: The full postal address of the sending institution.
Comments: The address should be displayed as continuous text, no
line breaks, only commas and spaces as required.
Description: The telephone number of the Contact Person.
Comments: The use of national and international codes depends on
the circumstances of the sending and receiving institutions.
Description: The facsimile number of the Contact person.
Comments: The use of national and international codes depends on
the circumstances of the sending and receiving institutions.
Description: The email address of the Contact person.
Description: This field allows for the inclusion of data or
standards that have not been included in this publication. The data is likely to be of
particular interest to the sending and receiving institutions, who wish to use a HISPID
type format for data fields which have not been described in this standard.
Domain/Range/Values: Alphanumeric; the field identifier
'nonstandard' is followed by a suggested unique field identifier (all lowercase (a-z) or
at least first letter lowercase) to be used in the transfer file; which is followed by a
brief explanation (if necessary); the syntax of the data (whether alphanumeric or
numeric); and the reference to the standard used in this new field (if necessary)(all
enclosed by round brackets and, within, each separated by a semicolon and space)(refer
example below).
If the data for any one standard are being transferred in several
fields, then each unique field identifier is separated by a space followed by the
necessary explanatory information in round brackets.
If more than one non-standard HISPID field (based on different
standards) is being used in the transfer file then each must be separated by a semicolon
and space (; )(refer example, below).
Since this field is alphanumeric (text), the data must be enclosed by
double quotations ("); all data must be on one line; and the field must end with a
comma (,).
Note: Since conformity with the HISPID standard is an agreed
(essential) requirement for institutions interchanging data according to HISPID3 format,
institutions are strongly urged to modify their interchange data so that they conform with
one or more of the current HISPID3 fields. However, when circumstances preclude this, the Non-Standard
Option may be used to interchange such data. If an institution wishes to interchange
non-standard data, then they are requested to notify the HISPID coordinator (editor) so
that these additional fields can be considered for inclusion in future versions of HISPID.
In the following example, the 'nonstandard' information is presented on
more than one line for readability.
Example 1:
nonstandard "pol (Pollinator; alphanumeric - scientific name of
pollinator and authority at lowest level name or epithet); arch (Plant architectural
models; alphanumeric; F. Hall� et al. 1978. 'Tropical trees and forests',
Springer-Verlag: Berlin)",
Example 2:
If an institution is unable to provide information in the format of any
particular HISPID3 field, as here defined, because they combine two or more of these
fields together in such a way that the data are unable to be separated, then the Non-Standard
option can be used.
For example, if an institution combines the Substrate and Soil
Type fields together, and the Vegetation and Associated Species Fields
together, in such a way that they are unable to separate these elements into separate
fields, then a new 'Transfer code' for each pair of information can be formed, with the
'Transfer codes' of the segregate fields cited in round brackets, and each of these
Transfer codes separated by a comma. It is then understood that the Domain/Range/Values
and other Comments of each still applies.
nonstandard "subsoil (sub, soil); vegass (veg, asspp)",
subsoil is the nonstandard identifier for the combined Substrate and Soil Type fields;
vegass is the nonstandard identifier for the combined Vegetation
and Associated Species fields.
Comments: The non-standard fields would have to be programmed
into the receiving database, as well as into the HISPID insert program.
Description: A field to indicate how the records of the file
should be processed.
Domain/Range/Values: Alphabetic; this field must consist of one
of the values in the table below:
Values in Field | Meaning |
delete | delete all records in file from institutional database receiving transfer file |
insert | all records in file to be added to receiving database |
update | update relevant fields of all records in file in receiving database |
Comments: This field should be used in conjunction with the Description
of File Contents and Other Comments field (refer below). The 'delete' option is used
when previously received collections are know to be sufficiently inaccurate that it is
recommended that the specimen be removed from the herbarium. The reason for this would be
explained in the Description of File Contents and Other Comments field (refer
below).
The 'insert' option is used for new records being sent to the receiving
database. This is the default value for all exchange data.
The 'update' option is used for records already held in the receiving
database which have been modified and included in the current transfer file. This option
would be used for returning redeterminations and other corrections to the receiving
institutions.
Description: A field to indicate the nature of the records
contained in the file.
Domain/Range/Values: Alphabetic; this field must consist of one
of the values in the table below:
Values in Field | Meaning |
exchange | records in file to be added to receiving database as part of exchange of herbarium material |
loan | electronic herbarium data associated with loan of herbarium material |
repatriation | repatriation of electronic data (from duplicate material held at sending institution to receiving institution) to the database held at the latter institution. |
Comments: These key values may be used to automatically implement
the procedures to be followed by the receiving institution. This field should be used in
conjunction with the Description of File Contents and Other Comments field (refer
below).
Description: A brief description of the content of the current
HISPID file.
Domain/Range/Values: Alphanumeric; free text.
Example 1: Description of records being transferred as
part of an herbarium loan:
content | "Herbarium loan 96/014, Myrtaceae data, from NSW to MO", |
Example 2: Description of transfer file containing
corrections to the plant name (Record Identification Group of fields):
content | "Redeterminations and other corrections to the plant name fields, from BRI to LAE", |
Comments: This field may be used in conjunction with the File
Descriptor Flag (above).
Description: The internet URL (Universal Resource Locator) where
the records in this file can be found.
Relevant standards: Internet URL, RFC 1738 (refer URL
http://www.w3.org/pub/WWW/Addressing/rfc1738.txt or URL
http://www.w3.org/pub/WWW/Addressing/URL/Overview.html)
Domain/Range/Values: Alphanumeric; any valid internet URL.
Comments: This information can refer to either a fixed export
file, to an on-line query, or can link to a specimen database gateway.
This group of fields identifies the data records of the transfer file,
that is, it describes the accession-based (specimen-based) information being interchanged.
It is essential that these fields match exactly for the various exchange options to work
effectively.
The fields in this group include the Institution Code and Accession
Identifier, as well as the Record defining field identifiers.
Description: The single character } indicating the end of a
HISPID3 Record.
Domain/Range/Values: Must contain the symbol '}' only.
Comments: To be found at the end of each HISPID3 record
indicating the end of the data of a record, prior to beginning the next record or the endfile
identifier if it is the last record in the transfer file.
TDWG Short name: HERBARIUM
Description: The standard code for the Institution to which the
plant record refers.
Relevant standards: Index Herbariorum, International Directory
for Botanic Gardens, ABIS, ITF, TLR
Domain/Range/Values: The code must consist of an entry of 1�7
uppercase letters (A�Z), no embedded spaces. This field must be filled.
Comments: When inserting the accession information into a
receiving database, the Institution Code combines with the Accession Identifier
to make up the unique Donor's accession identifier for each record.
It is perhaps not necessary to include this field in a 'home' database
since it may be appended to the record as the interchange file is generated. However, it
will be necessary if the herbarium chooses to keep records of other institutions'
collections of particular groups (for research purposes for example).
A problem with this field may arise with herbaria associated with
botanic gardens; it is desirable that the herbaria and botanic gardens have the same
abbreviation. If the record is primarily referring to an herbarium voucher, then the
herbarium code should always be used in the transfer file. The distinction between
herbarium and living material can be handled by various flags in the Collection group.
If an institution's herbarium does not have an official code,
then a temporary one should be assigned. However, it is essential that the institution
receiving the transfer file is aware of the code being used. This information should be
included in the Description of File Contents and other Comments field (refer
above).
TDWG Short name: UNIQUEID, ACCESSIONID
Description: The unique identifier of the record, often called
'Accession Number', used internally by the institution to record each accession.
Relevant standards: ABIS, ITF, TLR
Domain/Range/Values: Alphanumeric; the Accession Identifier
field may consist of any characters in the ASCII character set, no embedded spaces.
1. The Accession Identifier should be a unique set of characters that identifies each accession in the institution's own record system.
2. The same value of the Accession Identifier should not be used
again for a separate, unrelated specimen in that institution.
Comments: Institutions differ widely in the way they accession
and record herbarium specimens with one result that numbering systems (sometimes multiple)
have been applied in fundamentally different ways. In some institutions this number refers
to a unique specimen accession number, in others the specimen parts are accessioned
individually and each part (eg. multiple sheets) has its own accession number, but
supplementary material such as spirit and fruit may carry the number of the first sheet.
The application of different specimen/accession number systems is a source of potential
confusion where the specimen number and accession number may or may not be the same thing.
However, only the Accession Identifier is used in HISPID3. This single number will either
identify the single herbarium material or the group of material (when several identifiers
are used for different elements of an accession).
Unlike herbaria, many botanic gardens include punctuation within their
Accession Identifier, eg. 82�BG�24�31. It is vital for an institution to be consistent
on whether the punctuation is included in the HISPID3 transfer format.
This group consists of a single field which indicates the basis of the
record being interchanged.
TDWG Short name: RECSOURCE, NATOBJECT
Description: A code indication of the type of item to which the
record refers.
Relevant standards: ABIS
Domain/Range/Values: Alphabetic; as defined below:
Values in Field | Meaning |
Collection | Plant specimen |
Electronic | Electronic record only, specimen no longer available |
Literature | Reference |
Observation | Observation, including photograph of plant, but not of specimen |
Photograph | Photograph of specimen |
Comments: The default should be 'Collection' for a
specimen�based record. In the absence of any other value, a specimen�based record is
assumed.
The values 'Observation' and 'Literature' may be used when
the presence of a taxon is solely based on an observation or a published reference to an
herbarium specimen held in another institution (respectively). The value 'Electronic'
is used when the presence of a taxon is solely based on an electronic record of an
herbarium specimen which is no longer available.
This group of fields completely describes the botanical name of the
record. These fields also enable the identification of cultivars and hybrids and
intermediates using either binomials or hybrid formulae, as well as qualified
identifications.
These fields enable the interchange of either the 'full' scientific
(Latin) name of a plant or the 'limited' scientific name.
2. If a 'full' taxonomic name is not required, then an abbreviated
('limited') scientific name can be used to precisely refer to the taxon. This option is
also available in HISPID3. Such a 'limited' scientific name is transferred according to
the following rules:
If only a species name is required then:
only the genus name and the specific epithet are required. The
authority is not required unless there is some possibility of confusion between this
species and a homonym.
If the record refers to an infraspecific taxon then:
only the genus name, specific epithet and the lowest level
infraspecific epithet are required. The authority is not required unless there is some
possibility of confusion between this infraspecific taxon and a homonym.
The module for the Plant Name is based on Bisby, F.A. (1994) 'Plant
names in botanical databases', Plant Taxonomic Database Standard No. 3 Version 1.00 (TDWG
/ Hunt: Pittsburgh).
Hybrids and Intergrades present considerable problems for handling of
their names in electronic storage and transfer. The system presented here differs from
ITF2, in that it does not indicate the taxonomic rank at which the hybrization or
intergradation occurs. For example, in HISPID3, if the Hybrid Flag field is filled,
then the name of the 'first' parent is transferred in the 'default' HISPID3 name fields
(eg. Genus Name, Species Epithet, Infraspecific Epithet) and the
'second' parent is transferred in the 'hybrid' name fields (eg. Genus Name Parent 2
Hybrid, Species Epithet Parent 2 Hybrid, Infraspecific Epithet Parent 2
Hybrid). Unlike ITF2, this system readily allows for the interchange of hybrids and
intergrades resulting from parents at different rank (eg. a hybrid between one species and
the variety of another species).
Although the application of vernacular (common) names is not as
rigorously controlled as scientific names, and they vary greatly and are often not unique
for individual species, institutions may wish to interchange this information. A suggested
format for interchanging these data are included (refer Vernacular Names).
The names of higher groups such as suprafamilial groups and families are
not required in the HISPID3 transfer file because each accepted genus name in the plant
kingdom is unique. However, these data may be interchanged, using the fields Suprafamilial
Group Name and Family Name.
It is not necessary to include the authorities of the species and
infraspecific names in a HISPID3 transfer file. However, the inclusion of authorities with
the botanical names prevents confusion between homonyms. If these authorities are
required, then they can be included in the transfer file. To minimise variation in the
citation of the names of authors, it is recommended that a published standard for the
citation of authorities be used. One such standard is Brummitt, R.K. & Powell, C.E.
(1992) 'Authors of plant names' (Royal Botanic Gardens: Kew)(endorsed by the International
Working Group on Taxonomic Databases for Plant Sciences - TDWG).
Mixed collections are unacceptable and must be handled by duplicate
records or, if the mixture is not significant, by a note in the Name Comments
field.
TDWG Short name: CLASS (?)
Description: The relevant suprafamilial group name of the taxon
referred to in the record.
Relevant standards: ABIS (supra generic category), ITF
Domain/Range/Values: Alpha; any valid suprafamilial group name,
with first letter in uppercase.
Comments: This field allows for material being sent for
identification, particularly when even the family may not be known.
The ABIS standard included in this field any suprageneric category
including family (see next field) and any other arbitrary grouping.
All plant groupings above the rank of genus are assigned automatically,
the name depending on the classification system employed. As each institution uses its own
classification system, in many cases different from others, this field and the next two
fields may not always be a useful part of the interchange standard. However, it is
simple to ignore this information when loading the data (if it is not required or is
unsuitable), but it may be useful when reviewing the taxonomic system under which the data
has been compiled when loading the file into a database.
TDWG Short name: FAMILY
Description: The family name appropriate to the Genus name field,
entered in full.
Relevant standards: ABIS (supra generic category), ITF
Domain/Range/Values: Alpha; any valid plant family name, with
capitalisation of the first letter only. If the name of the plant family is unknown, then
this field may contain the value UNKNOWN (in uppercase). In this case, the remaining name
fields should not be filled.
Comments: There is no universally accepted classification of
plant genera into families, and several systems are in use in herbaria. Individual
herbaria may choose to store two (or more) family fields to reflect different
classification systems.
If institutions store family names or standard nomenclature in an
abbreviated or encoded form, these must be expanded for transfer.
The ABIS standard includes this field in a suprageneric category (see
previous field).
Description: A field to indicate the rank of the suprageneric
group name of the plant.
Relevant standards: ABIS (supra generic category)
Domain/Range/Values: Alpha; any valid suprageneric group rank,
below the rank of family and above the rank of genus, capitalisation of the first letter
only.
Comments: See comments on conventions and necessity of this type
of information under Family Name and Suprafamilial Group Name fields.
This field must contain the full name of the rank of the suprageneric
group, eg. 'subfamily'.
Description: The suprageneric group name of the plant, entered in
full.
Relevant standards: ABIS (supra generic category)
Domain/Range/Values: Alpha; any valid suprageneric group name,
below the rank of family, capitalisation of the first letter only.
Comments: See comments on conventions and necessity of this type
of information under Family Name and Suprafamilial Group Name fields.
If the name of the genus of the plant is unknown, then this field does
provide a higher level of identification than does the Family Name field alone.
The interchange of hybrid formulae and intergrade names is particularly
difficult in a flat�file format because the relational nature of these data cannot be
readily maintained. Unlike ITF2 which has Hybrid Flag fields for intergeneric,
interspecific and infraspecific hybrids and intergrades, HISPID3 has only one (namely, Hybrid
Flag field, refer below). In HISPID3, the Hybrid Flag indicates the type of
hybrid, grafts, chimaera or intergrade involved, but does not describe the rank to which
it applies. If the name is a Latin or non-Latin collective name, or if the name is a graft
or chimaera, then only the standard 'default' HISPID3 name fields are required in
the transfer file. For example, the name Lonicera x tellmaniana would be
tranferred with the letter 'x' in the Hybrid Flag field, 'Lonicera' in the Genus
Name field, and 'tellmaniana' in the Species Epithet field.
The concept of 'parent 1' and 'parent 2' has been implemented in HISPID3
to handle the transfer of names in the form of hybrid formulae and intergrades.
Example 1: the intergeneric hybrid Rhododendron x Vaccinium
would transferred with the letter 'H' in the Hybrid Flag field, 'Rhododendron' in
the Genus Name field ('parent 1' - transfer code: gen) and 'Vaccinium' in
the Second Hybrid Genus Name field ('parent 2' - transfer code: genhy2).
That is:
hyb | "H", |
gen | "Rhododendron", |
genhy2 | "Vaccinium", |
Example 2: the hybrid Prostanthera cuneata x Prostanthera
lasianthos var. subcoriacea would be transferred with the letter 'H' in the Hybrid
Flag field, 'Prostanthera' in the Genus Name field, 'cuneata' in the Species
Epithet field ('parent 1' - transfer code sp), 'lasianthos' in the Second
Hybrid Species Epithet field ('parent 2' - transfer code sphy2), 'var.' in the Second
Hybrid Infraspecific Rank Flag ('parent 2' - transfer code isprkhy2), and
'subcoriacea' in the Second Hybrid Infraspecific Epithet field ('parent 2' -
transfer code: isphy2). In this example, hybrid formulae which describe the results
of hybridisation at different ranks can be effectively interchanged. That is:
hyb | "H", |
gen | "Prostanthera", |
sp | "cuneata", |
sphy2 | "lasianthos", |
isprkhy2 | "var", |
isphy2 | "subcoriacea", |
Example 3: the hybrid Magnolia campbellii subsp. mollicomata
x Magnolia sprengeri var. diva would be transferred as:
hyb | "H", |
gen | "Magnolia", |
sp | "campbellii", |
isprk | "subsp.", |
isp | "mollicomata", |
sphy2 | "sprengeri", |
isprkhy2 | "var.", |
isphy2 | "diva", |
Description: A field to indicate whether the plant name refers to
a hybrid, graft chimaera or intergrade, without reference to rank.
Relevant standards: ITF, MFN, Bisby (1994).
Domain/Range/Values: If the accession is a hybrid, graft chimaera or intergrade, then the Hybrid field must consist of one of the characters in the table below:
Values in Field | Nature of name in Genus Name field |
x | A Latin collective name for a hybrid |
G | A non-Latin collective name for a hybrid |
H | A hybrid formula for a hybrid |
+ | A graft hybrid or graft chimaera |
� | An intergrade of non-hybrid nature |
Comments:
1. The rules associated with these values are outlined under Genus Name field.
2. For interchange and data storage purposes, the value in this field for a hybrid is a lowercase 'x' not a multiplication sign (as specified in the International Code of Botanical Nomenclature), since the multiplication sign does not occur in the ASCII character set.
3. If an 'x' is placed in this field, then the plant name must be validly published under the ICBN.
Notes: ITF includes the letter 'U' in the 'Infraspecific
Hybrid Flag' (refer ITF2) to indicate a Cultivar group name. However, HISPID3 only uses
the Cultivar Group Name field (refer below) to transfer these data.
TDWG Short name: GENUS
Description: The name of the genus of a plant or ,if part of a
hybrid formula or intergrade, then the name of the first 'parent' of that formula or
intergrade, entered in full.
Relevant standards: ABIS, ITF, MFN, Bisby (1994).
Domain/Range/Values: Alpha; any valid genus name, capitalisation
of the first letter only.
Comments: This field, combined with the following Species
Epithet and Infraspecies Epithet fields, constitute the minimum taxonomic
information for the identity of the specimen.
This field may contain an embedded hyphen, in which case the second word
is in lowercase
1. This field must contain one of the following:
1.1 A validly published generic name under the ICBN or a manuscript
name.
If the Hybrid Flag field is not filled (not transferred), then this field must contain:
1.1.2 A non�hybrid name, validly published under the ICBN or a
manuscript name.
If the name of the genus of the plant is unknown, then:
1.1.3 This field should not be filled. In this case, the remaining name
fields should also not be filled.
If the Hybrid Flag is H and the name is an intergeneric hybrid name, then:
1.1.4 This field must contain the first 'parent' of a hybrid formula for
an intergeneric hybrid name, validly published under the ICBN, eg. 'Rhododendron' for the
hybrid formula Rhododendron x Vaccinium
If the Hybrid Flag is x and the name is an intergeneric hybrid name, then:
1.1.5 This field must contain an intergeneric hybrid name, validly
published under the ICBN, eg. Halimiocistus for x Halimiocistus sahucii.
If the Hybrid Flag is + and the name is an intergeneric graft hybrid or graft chimaera, then:
1.1.6 This field must be the name of an intergeneric graft hybrid or
graft chimaera, validly published under the Cultivated Code, eg. Crataegomespilus for + Crataegomespilus
dardarii.
If the Hybrid Flag is - and the name is an intergeneric intergrade, then
1.1.7 This field must contain the name of the first 'parent' of the
intergrade.
TDWG Short name: GENUS
Description: The second name of a hybrid formula or intergrade
between two plant genera, entered in full.
Domain/Range/Values: Alpha; any valid genus name, capitalisation
of the first letter only.
Comments: Refer discussion under HYBRIDS, GRAFTS, CHIMAERA AND
INTERGRADES and compare with Genus Name field, above.
Description: The subgeneric group name of the plant, preceded by
its rank, entered in full.
Relevant standards: ITF
Domain/Range/Values: Alpha; any valid subgeneric group
name, capitalisation of the first letter only.
Comments:
1. The subgeneric group name must be a single word.
2. The first letter must be in uppercase (A�Z), the rest of the word in lowercase letters (a�z).
3. One or two hyphens are permitted in the word; no characters other than the letters outlined above are permitted.
This field must contain a validly published subgeneric group name under
the ICBN.
This field must also contain one of the following abbreviations of the
rank of the Subgeneric Group name:
Abbreviation | Full subgeneric group name |
subgen. | Subgenus |
sect. | Section |
subsect. | Subsection |
ser. | Series |
subser. | Subseries |
If the name of the genus of the plant is unknown, then this field must
not be filled. In this case, the remaining name fields should also be unfilled.
If the species name of the plant is unknown, then (if filled) this field
does provide a higher level of identification than does the Genus Name field alone.
Description: This qualifier permits the Species Epithet
field to be used for normal species names, as well as names of aggregate (refer Comments
1, below) or segregate species.
Relevant standards: ITF; Bisby (1994).
Domain/Range/Values:
1. If the Species Epithet field is not filled, then this field must not be filled.
2. If the Hybrid Flag is filled and the value in that field refers to an interspecific hybrid, then this field must not be filled.
Otherwise:
3. This field must consist of one of the values in the table below,
which refers to the following situations in Species Epithet field:
Content of field Nature of Name in Species Epithet field
agg. | An aggregate species |
s. lat. | aggregate species (sensu lato) |
s. str. | segregate species (sensu stricto) |
Comments:
1. If the entry is 'agg.', then the plant has been identified to an aggregate species, and not to any of the segregate microspecies within the aggregate.
2. If this field is filled, then Infraspecific Rank Flag and Infraspecific Epithet fields must not be filled.
3. The terms collective species or species groups are sometimes also used in plant names. They should be treated as for aggregate species.
4. Under the current standards, it is not possible to use the aggregate/segregate concept at levels other than the species level.
TDWG Short name: SPEPITHET
Description: The species epithet of the plant or ,if part of a
hybrid formula or intergrade, then the name of the first 'parent' of that formula or
intergrade, entered in full.
Relevant standards: ABIS, ITF, TLR, MFN, Bisby (1994).
Domain/Range/Values: Alpha; any valid species name, all
lowercase, no embedded spaces.
Comments:
1. The specific epithet must be one word (except as in the cases of Rules 1.1, 1.2, 3 and 4, below).
2. It must consist of lowercase letters (a�z), and may contain one or two hyphens. No other characters are permitted (except in the cases of Rules 1.1 and 1.2).
3. The field may be left unfilled if the species epithet is unknown. It must be left unfilled if the Genus name is unknown (Genus Name field) or the Family Name field has the value UNKNOWN.
4. If the specific epithet of a plant is uncertain, then the following
name fields should not be filled.
Rules:
1. If the Hybrid Flag is not filled, then this field must contain a validly published, non�hybrid specific epithet under the ICBN, except in the following special cases:
1.1 If the plant has not been identified to specific level, the field must be left unfilled, as must the following name fields. (The abbreviation sp. should not be entered in these circumstances.)
1.2 If the plant represents a new species which has not been formally described, then sp. nov., sp. A, sp. 1 (or other acceptable codes) should be entered, if possible followed by a unique identifier, such as the collector's name and number or the locality. The following Species Author field must be left unfilled.
2. If the Hybrid Flag is x and it refers to an interspecific hybrid, then the entry in the field must be a Latin Collective name for an interspecific hybrid, eg. tellmaniana for Lonicera x tellmaniana.
hyb | "H", |
gen | "Rhododendron", |
sp | "dichroanthum", |
sphy2 | "griersonianum", |
If only one parent is known, then enter the specific epithet of that parent alone (without the lower case letter 'x').
hyb | "+", |
gen | "Xyringa", |
sp | "correlata", |
5. If the Species Qualifier field is agg., then the entry in the field must be a validly published specific epithet under the ICBN, used for the name of the group of species concerned. The word agg. should not be included in the entry of this field.
The abbreviation sp. is not interchanged in HISPID3 if a plant has not
been identified to the species epithet level (Rule 1.1, above).
For further information refer Comments under Genus Name
Field.
TDWG Short name: SPEPITHET
Description: The second specific epithet of a hybrid formula or
intergrade between two plant species, entered in full.
Domain/Range/Values: Alpha; any valid species name, all
lowercase, no embedded spaces (refer Species Epithet field, above).
Comments: Refer discussion under HYBRIDS, GRAFTS, CHIMAERA AND
INTERGRADES and Species Epithet field, above.
Notes: The authority of the species names are not given when the
name is a hybrid formula or intergrade.
TDWG Short name: SPAUTHOR
Description: The author citation of the species (as given in Genus
Name and Species Epithet fields, above), in standard abbreviated form
Relevant standards: TLR, MFN, Brummitt & Powell (1992), Bisby
(1994).
Domain/Range/Values: Alpha; any valid author abbreviation, initials and first letter of surname in uppercase, and other characters as described below:
1. The full name of a species (as transferred in the Species Epithet field) must include this field.
2. This field is not filled for the full name of a species aggregate (as transferred in the Species Qualifier and Species Epithet fields).
3. Alphabetic letters (A-Z, a-z), fullstops (periods), pairs of brackets, apostrophes, hyphens, ampersands (&) and spaces are all valid entries for this field.
4. For the citation of joint authors, it is recommended that the ampersand (&) is used between the last two names, not 'et' or 'and'. If more than two authors, then a comma and space (, ) are used to separate all authors except for the last two.
5. Names in languages other than the English languages should be transliterated into the roman alphabet. However, if institutions are able to receive and send other alphabetic characters (eg. if using UNICODE), then these may be included in the transfer file.
6. Parenthetical author or authors in the recommended form enclosed in
round brackets at the beginning of the field.
Comments: Since the author is unique to any accepted plant name,
it is usually not essential for this information to be interchange.
Notes: The authority of the species name is not given when the
name refers to a hybrid formula or an intergrade. Therefore, the information transferred
in this field does not refer to the Second Hybrid Species Epithet field.
TDWG Short name: INFRARANK
Description: A field to indicate the lowest infraspecific
rank for the name in the Infraspecific Epithet field. The contents of this field
are confined to the rank of the infraspecific name of non-collective, and non-cultivar
group infraspecific taxa. It also indicates the lowest infraspecific rank for the
name of the first 'parent' of a hybrid formula or intergrade.
Relevant standards: ITF (in part), MFN, Bisby (1994).
Domain/Range/Values: Alpha; if the Infraspecific Epithet
field is filled and the plant is not a Collective hybrid and is not a
cultivar, then this field must be one of the values in the table below:
Values in field | Rank of Name in Infraspecific Epithet field (Non-hybrid names) |
subsp. | Subspecies |
var. | Variety |
subvar. | Subvariety |
f. | Form |
subf. | Subform |
Comments: If the Infraspecific Epithet field is not
filled, then this field must not be filled.
Notes: The contents of this field represent the lowest
infraspecific rank for this name.
ITF excludes the infraspecific rank of hybrids from this field.
Guidelines:
Under the rules of the ICBN, every trinomial below the level of species
is unique. Hence, Rhododendron arboreum subsp. delavayi var. peramoemum can
be known uniquely as Rhododendron arboreum var. peramoemum. Therefore the
name can consist of the genus, the species and the lowest infraspecific taxon name,
qualified by its rank.
TDWG Short name: INFRARANK
Description: A field to indicate the lowest infraspecific
rank for the name in the Infraspecific Epithet field of the second 'parent' of a
hybrid formula or intergrade. The contents of this field are confined to the rank of the
infraspecific name of non-collective, and non-cultivar group infraspecific taxa.
Relevant standards: ITF (in part), MFN, Bisby (1994).
Domain/Range/Values: Alpha; if the Infraspecific Epithet
field is filled and the plant is not a Collective hybrid and is not a
cultivar, then this field must be one of the values in the table below:
Values in field | Rank of Name in Infraspecific Epithet field (Non-hybrid names) |
subsp. | Subspecies |
var. | Variety |
subvar. | Subvariety |
f. | Form |
subf. | Subform |
Comments: Refer Infraspecific Rank Flag field (above) for
further details.
Notes: The transfer code (isprkhy2), as for other hybrid
fields which are used to transfer information about the second 'parent' of the hybrid
formula or intergrade conclude with 'hy2'. This should not be confused with isp2rk which
is the transfer code for the Second Infraspecific Rank Flag and isp2rkhy2
which is used to transfer the rank of the Second Hybrid of the Second Lowest
Infraspecific Epithet when the full taxonomic name is being transferred.
TDWG Short name: INFRANAME
Description: The epithet of the lowest infraspecific rank
of the name, entered in full.
Relevant standards: ABIS, ITF, TLR, MFN, Bisby (1994).
Domain/Range/Values: Alpha; any valid infraspecific taxon
epithet, all lower case.
Comments:
1. The entry must be one word (except as outlined in Rules, below).
2. It must only consist of lowercase letters (a�z), and may contain one or two hyphens. No other characters are allowed (except in the case of Rules 1.1, 2, 4 and 5, below).
3. The field may be left unfilled to indicate that the plant is
not identified below the species level. It must not be filled if the species
epithet is not known. Indeterminate entries like 'subsp.', 'var.' etc., are not
permissible.
See Comments under Infraspecific Rank Flag and Species
Epithet. fields.
Rules:
1. If the Infraspecific Rank Flag is subsp. var., subvar., f. or subf., then the entry must be an epithet in the rank denoted by that field, validly published under the ICBN, except in the following special case:
1.1 Where a new infraspecific taxon has not been formally described, subsp. nov., var. nov., subvar. nov., f. nov., or subf. nov. may be entered, if possible followed by a unique identifier, such as the collector's name and number or the locality
2. If the Hybrid Flag value is 'H', then the entry must represent the first 'parent' in a hybrid formula
If the Hybrid Flag value is 'H' but only one 'parent' of a hybrid formula is known, then enter the infraspecific epithet of that parent alone
3. If the Hybrid Flag is 'x', then the entry must be a Latin collective name for an infraspecific hybrid. The name must be valid under the Cultivated Code.
4. If the Hybrid Flag value is G, then the entry must be a
non-Latin collective name. It must be valid under the Cultivated Code.
Guidelines:
Under the rules of the ICBN, every trinomial below the level of species
is unique. Hence, Rhododendron arboreum subsp. delavayi var. peramoemum can
be known uniquely as Rhododendron arboreum var. peramoemum. Therefore the
name can consist of the genus, the species and the lowest infraspecific taxon name,
qualified by its rank.
TDWG Short name: INFRANAME
Description: The epithet of the lowest infraspecific rank
of the name of the second 'parent' in a hybrid formula or intergrade, entered in full.
Relevant standards: ABIS, ITF, TLR, MFN, Bisby (1994).
Domain/Range/Values: Alpha; any valid infraspecific taxon
epithet, all lower case.
Comments: Refer the Infraspecific Epithet field for
further details (above).
Notes: The authority of the infraspecific names are not given
when the name is a hybrid formula or intergrade.
TDWG Short name: INFRAUTHOR
Description: The author citation of the lowest
infraspecific epithet, in standard abbreviated form.
Relevant standards: ITF; Bisby (1994).
Domain/Range/Values: See under Species Author field,
above.
Comments: See under Species Author field.
Notes: The authority of the infraspecific names are not given
when the name is a hybrid formula or intergrade.
Description: An additional field to indicate the rank of the second
lowest infraspecific name (as given in the Second Infraspecific Epithet field),
which is at a higher level to that of the Infraspecific Epithet field. This field
is used when a 'full' taxonomic name is required (refer Comments and Notes,
below). This field is also used when a 'full' taxonomic name is required for the first
'parent' of a hybrid formula or intergrade.
Relevant standards: ITF; Bisby (1994).
Domain/Range/Values: See under Infraspecific Rank Flag,
above. Note: these additional fields are for non-hybrid infraspecific taxa, not for
hybrids, Collective names or cultivars.
Comments: This field has been included for those
institutions who wish to transfer and/or receive a complete ('full') taxonomic name (as
defined in Notes, below) in a form which is more easily inserted into a database
than the contents of the Full Name field (p. 47). When more than one infraspecific
name is being transferred, the following fields refer to the lowest level
infraspecific name: Infraspecific Rank Flag, Infraspecific Epithet, and Infraspecific
Author; whereas the Second Infraspecific Rank Flag, Second Infraspecific
Epithet, and Second Infraspecific Author all refer to the second lowest
level of infraspecific name (eg. var. and subsp., respectively). If institutions wish to
transfer more than two levels of infraspecific names in this format, then the third
lowest level has the number 3 included in the Transfer Code identifier (eg.
isp3rk, isp3, isp3au), and so on, as appropriate.
Notes: The 'full' scientific name includes the genus and species
names, together with all infraspecific names and ranks (where relevant) and all
appropriate authorities. Such 'full' names are extremely useful, especially if the
complete taxonomic name of the taxon is required.
Description: An additional field to indicate the rank of the second
lowest infraspecific name of the second 'parent' of a hybrid formula or intergrade (as
given in the Second Hybrid of the Second Infraspecific Epithet field), which is at
a higher level to that of the Second Hybrid Infraspecific Epithet field. This field
is used when a 'full' taxonomic name is required.
Relevant standards: ITF; Bisby (1994).
Domain/Range/Values: Refer Second Infraspecific Rank Flag,
above.
Comments: Refer Second Infraspecific Rank Flag, above.
Description: An additional field for the epithet of the second
lowest infraspecific rank of the name of the plant, when a full taxonomic name is
required (refer Comments under Second Infraspecific Rank Flag field, above).
Relevant standards: ITF; Bisby (1994).
Domain/Range/Values: See under Infraspecific Epithet
field, above. Note: these additional fields are for non-hybrid infraspecific taxa, not
for hybrids, collective names or cultivars.
Comments: Refer Comments under Second
Infraspecific Rank Flag field, above.
Description: An additional field for the epithet of the second
lowest infraspecific rank of the name of the second 'parent' of a hybrid formula or
intergrade, when a full taxonomic name is required.
Relevant standards: ITF; Bisby (1994).
Domain/Range/Values: See under Infraspecific Epithet
field, above.
Comments: Refer Comments under Second
Infraspecific Rank Flag field, above.
Description: An additional field for the author citation of the second
lowest infraspecific epithet, in standard abbreviated form.
Relevant standards: ITF; Bisby (1994).
Comments: Refer under Infraspecific Author and Second
Infraspecific Rank Flag fields, above. Note: these additional fields are for
non-hybrid infraspecific taxa, not for hybrids, collective names or cultivars.
Notes: The authority of the infraspecific names are not given
when the name is a hybrid formula or intergrade.
Description: A free text field to allow for the inclusion of
vernacular (common) plant names.
Domain/Range/Values: Vernacular name followed by language of each
name in round brackets ( ).
Comments: If more than one vernacular name, then each name (and
language group) is separated by a comma and a space.
Rules for naming agricultural, forestry and horticultural plant have recently been revised in the International Code of Nomenclature for Cultivated Plants (Ed. P. Trehane, Quarterjack Publishing, 1995). Following the lead of ITF2, HISPID3 allows compatibility with this code by introducing two new fields, the Cultivar Group Name and the Trade Designation Name, in addition to the Cultivar Name field. These three fields allow for an accurate interchange of these plants, in accordance with the rules of the above code. The only names that may be used in this code are the Cultivar epithet, the Cultivar Group epithet, and the Trade Designation name (or other similar trade name).
Signs to indicate hybrids (x) or graft chimera (+) must NOT be used in any of the following three fields. Authors names are not required by the cultivated plant code, and should not be appended to the names given at any of the three ranks.
Examples (from ITF2), in HISPID3 transfer format:
1. Brassica oleracea Cauliflower Group
gen | "Brassica", |
sp | "oleracea", |
culgnam | "Cauliflower", |
2. Dracaena fragrans (Deremensis Group) 'Christianne'
gen | "Dracaena", |
sp | "oleracea", |
culgnam | "Deremensis", |
culnam | "Christianne", |
3.
Salix matsudana 'Tortuosa'
gen | "Salix ", |
sp | "matsudana", |
culnam | "Tortuosa", |
Description: The cultivar group name of a plant.
Relevant standards: ITF; Trehane (1995)
Domain/Range/Values: Alpha
1. An entry in this field should consist solely of the cutivar group name.
2. If the accession cannot be assigned to a cultivar group, then the field should not be filled.
Comments:
1. The cultivar group name must be a valid cultivar group name under the International Code of Nomenclature for Cultivated Plants. This field should not contain a cultivar name or trade designation name.
2. The first letter of each word of the cultivar group name should be uppercase.
3. The word 'Group' should not be appended to the cultivar group name; this is redundant in this field for transfer, or for database storage ('Group' can easily be appended to the information contained in this field in output programs).
4. The cultivar group name should not be enclosed in parentheses
(these can easily be added to the information contained in this field in output programs
if required).(refer CULTIVATED PLANT NAMES example 2, below).
Guidelines:
1. A cultivar group is an assemblage of similar, named cultivars within
a genus or species (including hybrid genera and species), eg. Lolium perenne Early
Group. Such groups are often associated with a cultivar name, and in this case the Group
Name is normally enclosed by round brackets, eg. Lolium perenne (Early Group) cv.
Devon Eaver. For further details, see Article 4 of the International Code of Nomenclature
for Cultivated Plants.
2. Under the provisions of the International Code of Nomenclature for
Cultivated Plants, cultivar group names are written in outputs as contained between round
brackets or square brackets when a cultivar name or trade designation is given; if
no cultivar or trade designation is given then these brackets are omitted. In outputs the
word 'Group' always terminates the cultivar group name: eg. Brassica oleracea
Cauliflower Group, Dracaena fragrans (Deremensis Group) 'Christianne' or Dracaena
fragrans [Deremensis Group] 'Christianne'.
Description: The cultivar name of the plant represented by this
record.
Relevant standards: ITF; Trehane (1995)
Domain/Range/Values: Alpha; any valid cultivar name. The entry
should consist solely of the cultivar name. The abbreviation 'cv.' should not be used
(except under Comments 3 below), nor should the entry be enclosed in single quotes
(these should be added in printed outputs only).
Comments:
1. The cultivar must be a valid name published under the International Code of Nomenclature for Cultivated Plants.
2. Where the cultivar name directly follows the generic name, as in Tulipa 'Apeldoorn', the fields between Genus name and this field should not be filled (namely, the fields from Subgeneric group name through to Cultivar Group Name).
3. If the record represents a cultivar of unknown name, then 'cv.'
should be entered in this field. This appears to contradict the approach with species
names, but in this case a blank, space or null does not imply that the taxon is an
unidentified cultivar.
Guidelines:
1. A cultivar is part of the variation of cultivated plants being clearly distinguished by attributes that are distinct, uniform, stable and are retained when propagated by a suitable means. For further details, see Article 2 of the International Code of Nomenclature for Cultivated Plants.
2. Under the provisions of the International Code of Nomenclature for Cultivated Plants, cultivar names are written in outputs as contained between single quotes, eg. Citrullus lanatus 'Sugar Baby'. Double quotes or the abbreviation prefix 'cv. ' are not permitted under the Cultivated Plant Code.
3 The first character of each word in a cultivar name should be in
uppercase (A-Z).
Description: The trade name of an accession, where the taxon has
a registered trade name or other similar trade designation.
Relevant standards: ITF; Trehane (1995)
Domain/Range/Values:
1. An entry in this field should consist solely of the trade designation name, if applicable.
2. If the accession does not bear a designated trade name, this field
should not be filled.
Comments: The trade name must be a valid name published under the
International Code of Nomenclature for Cultivated Plants and accepted by the International
Registration Authority for the group concerned.
Guidelines: Trade names are used in place of or additional to a
cultivar name when the accepted cultivar name is not considered suitable for marketing
purposes.
Description: The full name of the plant, including full author
citation, hybrid name, hybrid formula, collective name, cultivar name (as appropriate).
Relevant standards: ITF
Domain/Range/Values: Free text field. All previous rules, as
described under the above name fields, apply in this field.
Comments: This field allows the full taxonomic name (including
author citation), horticultural names, trade names and patents. Where there is more than
one infraspecific rank (eg. quadrinomials or pentanomials), the reduction of this plant
name to a trinomial (with only the lowest infraspecific rank cited) obscures much of the
infraspecific hierarchy (refer discussion under RECORD IDENTIFICATION GROUP above).
Description: Any comments about the name of the plant are
transferred in this field.
Domain/Range/Values: Free text field.
Comments: Although mixed collections are unacceptable in HISPID3,
this field can be used to refer to such collections when the mixture is not significant.
This group of fields conains three fields, Type Qualifier, Type
Status and Basionym, which covers the typification of the name of the taxon as
directly related to the accession record.
Description: This field provides standard terms to qualify the
identification of the type of the name of the record when doubts exist.
Domain/Range/Values: Alpha; as listed in the following table:
Values in Field |
Possibly |
Probably |
? |
Not |
Comments: This field is used in conjunction with Type Status
(below). If the Type Status field is not filled, then this field must not
be used.
TDWG Short name: TYPESTATUS
Description: A code indicating the type status of the record.
Relevant standards: TLR
Domain/Range/Values: Alpha; standard abbreviation, as listed in
the following table:
Values in Field Meaning of Abbreviation
EPI | epitype |
HOLO | holotype |
ISO | isotype |
ISOLECTO | isolectotype |
ISONEO | isoneotype |
ISOPARA | isoparatype |
ISOPARALECTO | isoparalectotype |
ISOSYN | isosyntype |
KLEPTO | kleptotype |
LECTO | lectotype |
NEO | neotype |
PARA | paratype |
PARALECTO | paralectotype |
SYN | syntype |
TOPO | topotype |
TYPE | Unknown type material |
Comments: This field is not to be filled if the record is
not one of these kinds of type.
Although topotypes have no taxonomic or nomenclatural status, the
category has been included for those who may wish to interchange this information.
Description: The plant name (frequently the basionym) of which
this specimen is a type, not necessarily the accepted name for the taxon.
Relevant standards: TLR
Domain/Range/Values: Alpha; a valid plant name, including
relevant rank identifiers (such as subsp., var.,) as required, conventional capitalisation
of name and author.
Comments: Although a specimen may be the type of more than one
basionym, this field must hold the most recent known name. When a specimen is the
type of more than one basionym, then the following additional fields refer to the second
most recent basionym, together with its type status: Type Status of Second Most
Recent Basionym and Second Most Recent Basionym fields (Transfer codes: tsta2
and basnam2, respectively). If more earlier basionyms are to be transferred, then
the third most recent values are interchanged in the : Type Status of Third Most
Recent Basionym and Third Most Recent Basionym fields (Transfer codes: tsta3
and basnam3, respectively), and so on, as appropriate. The type qualifier field may
be required to provide qualification to the identification of the types of the various
earlier basionyms. These additional fields are briefly described below.
If the record is not a type, then this field must not be
filled.
Description: This field provides standard terms to qualify the
identification of the type of the name of the second most recent basionym of the
record when doubts exist.
Domain/Range/Values: Alpha; as listed in Type Qualifier Flag
field (above).
Comments: This field is used in conjunction with Second Most
Recent Type Status field (below). If the Second Most Recent Type
Status field is not filled, then this field must not be used.
TDWG Short name: TYPESTATUS
Description: A code indicating the type status of the second
most recent basionym of the record.
Domain/Range/Values: Alpha; standard abbreviation, as listed in Type
Status field (above).
Comments: For further information refer to previous TYPIFICATION
GROUP fields (above).
Description: The second most recent basionym of which this
specimen is a type, not necessarily the accepted name for the taxon.
Domain/Range/Values: Alpha; a valid plant name, including
relevant rank identifiers (such as subsp., var.,) as required, conventional capitalisation
of name and author.
Comments: For further information refer to previous TYPIFICATION
GROUP fields (above).
Description: This field provides standard terms to qualify the
identification of the type of the name of the third most recent basionym of the
record when doubts exist.
Domain/Range/Values: Alpha; as listed in Type Status field
(above).
Comments: This field is used in conjunction with Third Most
Recent Type Status field (below). If the Third Most Recent Type
Status field is not filled, then this field must not be used.
TDWG Short name: TYPESTATUS
Description: A code indicating the type status of the third
most recent basionym of the record.
Domain/Range/Values: Alpha; standard abbreviation, as listed in Type
Status field (above).
Comments: For further information refer to previous TYPIFICATION
GROUP fields (above).
Description: The third most recent basionym of which this
specimen is a type, not necessarily the accepted name for the taxon.
Domain/Range/Values: Alpha; a valid plant name, including
relevant rank identifiers (such as subsp., var.,) as required, conventional capitalisation
of name and author.
Comments: For further information refer to previous TYPIFICATION
GROUP fields (above).
Notes: If additional TYPIFICATION GROUP fields are required for
fourth, fifth, etc. basionyms and types, then they should be transferred in the same
format as the previous fields.
This group of fields indicates the degree of confidence that can be
placed in the identification of a record.
The following comments on 'Identification Qualifiers' are relevant to
the HISPID3 fields Identification Qualifier and Rank Qualified Flag.
The degree of uncertainty of identification may be indicated by adding
various terms, such as '?', 'cf.' and 'aff.', to the name of a plant. The qualifying term
applies to the part of the name that immediately follows the qualifier, and they
can be placed in front of any element of the name. In a HISPID3 transfer file, taxa
qualified in this way are treated as positively identified only to the level one above the
rank qualified, for example, a record of Cypripedium aff. candidum is treated
not as a valid record of the threatened plant Cypripedium candidum but only as a
record for the genus Cypripedium that requires further checking to confirm whether
the plant is really C. candidum or another species.
With infraspecific taxa and cultivars, no distinction is made between
whether the term (eg. 'aff.') is added before the rank of the qualified part of the name
or after it. In other words, the Prunus maritima aff. var. gravesii and Prunus
maritima var. aff. gravesii are regarded as referring to the same taxon.
Description: The level to which the identification of the record
has been verified.
Relevant standards: ITF
Domain/Range/Values: Integer; the entry must be one of the values
in the table below:
Values in Field | Meaning |
0 (zero) | The name of the record has not been checked by any authority |
1 | The name of the record determined by comparison with other named plants |
2 | The name of the record determined by a taxonomist or by other competent persons using herbarium and/or library and/or documented living material |
3 | The name of the plant determined by taxonomist engaged in systematic revision of the group |
4 | The record is part of type gathering or propagated from type material by asexual methods |
Comments: If it is not known whether the name of the record has
been verified by an authority, then this field must not be filled.
Description: The name of the person or persons who verified the
identification of the plant, as qualified in the Verification Level field (above).
Their institutional affiliation may be cited, too.
Relevant standards: ABIS, ITF
Domain/Range/Values: Alpha; the full name of the verifier(s).
Comments: If it is not known whether the name of the record has been verified (that is, the Verification Level field has not been filled), then this field must not be filled.
1. The verifier's family name (surname; with initial letter uppercase) followed by comma and space (, ) then initials of given names (in uppercase and each followed by a full stop, without spaces). Titles should be omitted.
2. If two names are needed, the names (formatted as in point 1 above) are separated by a comma and a space. If several names are needed, then the first name (as formatted in point 1 above) may be followed by 'et al.'
3. The verifier's institution may also be cited (as a code) in round brackets.
Notes: If necessary, the first and or other given names should be
spelt out when there is a known chance of confusion. For example, to distinguish between
Wilson, Paul G. and Wilson, Peter G. (with a space after the given name; no punctuation,
except as separator between two names - refer point 2 above).
Description: The date on which the name of the plant was
verified.
Domain/Range/Values: Integer; year (4 digits) followed by month
(2 digits) and the day (2 digits), without spaces between them.
1. | In this notation, leading zeroes must be included for months and days, ie. March is coded as '03' not '3' and the 6th day is coded as '06' not '6'. |
Example: | |
19741008 | 8 October 1974 |
19120209 | 9 February 1912 |
2. | If the day of the month is not known, the last two digits should be omitted. |
Example: | April 1881 would preferably be transferred as 188104. |
3. | If the day and the month are not known, the last four digits should be omitted and just the 4 digits of the year information interchanged. |
Guidelines: The HISPID3 transfers the year as a full 4-digit
number to facilitate the use of the system in the next century, as well as to track
verifications from the previous century.
Description: The date on which the name of the plant was verified
when the date is not in a form which satisfies the international date data format (as
required in Verification Date field, above).
Domain/Range/Values: Alpha; free text.
Comments: This field will probably not be used very frequently,
but it may be useful when the verification date on a determinavit slip is not completely
legible. For example, the day and month may be decipherable, but not the year. Therefore,
the interpreted information can be transferred, even though not complete.
Description: Citation of literature used for identification.
Domain/Range/Values: Alphanumeric; free text field; cite each
author, journal or book title, followed by volume, year and pages (as relevant); each
component separated by comma and space.
Comments: Where multiple references are used, the most useful
reference should be mentioned first, and each reference separated by semicolons ';'.
Description: Chronological listing of previous identifications,
stating plant name, verifier, date, and reference.
Domain/Range/Values: Alphanumeric; free text field.
Comments: This field would be a concatenation of information from
previous Family Name, Genus Names, Species Epithet, Species Author,
Infraspecific Epithet, Infraspecific Author, Verifier's Name and Verification
Date fields for this record.
Some institutions may choose to keep:
Description: A field to indicate the nature of the taxonomic
verification
Domain/Range/Values: Alpha; the entry must be one of the values
in the table below:
Values in Field | Meaning |
conf. | confirmavit |
cit. | citavit |
det. | determinavit |
scrips. | scripsit |
vid. | vidit |
Description: The rank of the lowest name/epithet of the taxon qualified by the entry in Identification Qualifier field (see below).
Relevant standards: ITF
Domain/Range/Values: If the Identification Qualifier field is filled, then the entry in this field must be one of the values in the table below:
Values in Field | Rank qualified |
B | Below Family |
F | Family |
G | Genus |
S | Species |
I | first Infraspecific Epithet |
J | second Infraspecific Epithet |
C | Cultivar |
Comments: In each of these cases, the entry in the field that is
qualified (eg. Species, Cultivar) must be filled.
If the Identification Qualifier Field is not filled, then
this field must not be filled. That is, this field should only be used for plants
not confidently and/or fully determined.
Description: A standard term to qualify the identification of the
taxon when doubts have arisen while comparing the plant and the plant- description; refer
introductory note under CULTIVATED PLANT NAME (above) and previous field.
Relevant standards: ITF
Domain/Range/Values: If the identification does not require
qualification, then this field must not be filled.
If there is any doubt about the identification of the plant record, then
this field must contain one of the following:
Conventional Notation | Meaning |
aff. | Akin to or bordering |
cf. | Compare with |
Incorrect | Incorrect |
forsan | Perhaps |
near | Close to |
? | Questionable |
The above meanings are taken from Stearn, W.T. (1972). 'Botanical Latin'
(David & Charles: Newton Abbot).
Comments:
1. The 'Incorrect' coding has been introduced into HISPID3 to mark an identification where the name applied is known to be incorrect, but a new name has not yet been assigned. This field may be used when a loan and their electronic records are returned to the host institution to indicate that although the researcher excluded the specimen from one plant group, he/she was unable to provide a positive identification.
2. 'Forsan' and 'near' are frequently used historically.
3. "Near' is an occasional alternative for 'cf.' and '?'.
4. At the generic level, the symbol '?' is normally the only identification qualifier used.
5. The symbol '?' is to be interpreted as 'possibly not' the correct name of the rank nominated in the Rank Qualified Flag field. The '?' clarifies which name or epithet is questioned (usually the lowest rank).
6. The '?' symbol is not to be used to express doubts concerning the
lumping or splitting of certain taxa (refer Species Qualifier field, above).
Description: A description of any further qualifications to the
identity of the name of the record.
Domain/Range/Values: Alpha; free text.
This group of fields covers all the descriptive and coded spatial data
that describes the geographic position that a plant was collected from, including
supporting data such as altitude, depth (particularly for aquatic plants), and degree of
precision in citing the locality details.
Where relevant, all of the standard HISPID3 fields in this group, the
HABITAT GROUP, and the COLLECTION GROUP refer to the original wild source collection
information. That is, the information recorded in all of these fields (eg. Collection
Date, Primary Collector's Name, Country of Origin, Habitat, Locality,
Collection Notes, Primary Subdivision of Country of Origin, Secondary
Subdivision of Country of Origin, Specific Geographic Unit) refers to the
original wild source collection.
If the current accession was taken from a secondary source (eg.
cultivated material, of known or unknown wild source), then the relevant field identifiers
would all be prefaced by the word 'Subsequent' and the relevant Transfer Codes would be
prefaced by a lowercase 's'. For example, if an herbarium collection was taken from a
cultivated collection growing in an Australian botanic garden which had been originally
grown from seeds collected in the 'wild' from South Africa, then the Country field
value would be 'South Africa' (with Transfer code: cou), whereas the Subsequent Country
field (Transfer code: scou) would be 'Australia'. Likewise, the field which
contains the information about the collector's name of the current accession which was
taken from cultivated material would be known as Subsequent Collector's Name and the
Transfer code would be scnam. The same 'Domain/Range/Values' apply as for the
relevant 'primary' data fields.
Note: these 'subsequent fields have not be further described in
HISPID3, but they should be applied when required.
The geocode information of the 'Place of Origin' data are held in a
hierarchy of 4 levels. These are:
1. | a. | Political country (written in full), strictly following the ISO system; |
b. | Political country (codified), according to the ISO system; | |
2. | Basic Recording Unit of the World Geographical Scheme; | |
3. | A defined subdivision of the ISO unit; | |
a. | Primary subdivision of Country of Origin; | |
b. | Secondary subdivison of Country of Origin; | |
4. | The locality; | |
a. | Locality in text format; | |
b. | Special Geographical Unit. |
The information relates to the place where the plant was collected, not
to the full distributional range of the taxon.
The spatial data interchange standard followed by HISPID3 is based on
the Spatial Data Transfer Standard (SDTS). The use of this standard for data
transfer is expected to become common place. It has been accepted as a USA Federal
Information Processing Standard (FIPS) and as an Australian standard by Standards
Australia Committee IT/4. The Australia, New Zealand Land Information Council (ANZLIC)
has supported this choice by sponsorship of AUSDEC (Australian Spatial Data Exchange
Centre) whose purpose is to faciliate the introduction and adoption of SDTS in
Australia. AUSLIG (Australian Surveying and Land Information Group) have defined a profile
subset of SDTS which is applicable to their own data type. Full text of the Australian
SDTS standard is available from AUSDEC or from Standards Australia.
The interchange of the horizontal components of spatial data (eg.
Latitudes/Longitudes, Grids) in HISPID3 must follow:
Note: MGA94 and WGS84 (World Geodetic System 1984 - as modified
in 1994)(the reference frame used by GPS) are in agreement to within approximately 1
metre. For specific details of requirements for map grid references in HISPID3 refer Spatial
Grid fields (below).
The interchange of the vertical components of spatial data (eg.
Altitude, Depth) in HISPID3 must follow:
TDWG Short name: ISOCOUNTRY (?), BOTCOUNTRY, CONTINENT(?), REGION,
ISOREGION, BASICRECU
Description: The name of the country or major region where the
plant specimen was collected, entered in full.
Relevant standards: ABIS, ITF, TLR, WGSUB, ISO, Hollis &
Brummitt (1992)
Domain/Range/Values: Alpha; accepted standard full political
country name, uppercase.
Comments: If the name of the country where the plant was
collected is unknown, then this field should contain the value 'UNKNOWN' (in uppercase).
In this case, the following ISO Code for Country of Origin field must have the
entry 'XX' or 'XY'. All remaining 'location group' fields should be left unfilled.
It is recommended that the spelling of the country should be as
recognised by the International Standards Organization (ISO).
It is recommended that new country names be enclosed in square brackets,
after the old country name, where country names or boundaries have changed. The 2 letter
ISO codes in ISO Code for Country of Origin field (refer below) assist the updating
of countries where boundaries are changing.
Separate fields for state/province and country are needed to adequately
handle the situation with international collections.
Description: The 2 letter code for the representation of the name
of the country where the plant was collected, using the codes assigned by the
International Standards Organization (ISO).
Domain/Range/Values: The code must consist of 2 uppercase letters
(A�Z).
Comments:
1. This field can only contain a valid entry as defined by the International Standards Organization (ISO Standard 3166).
2. Two other entries are permitted in addition to those defined by ISO:
Values in Field | Meaning |
XX | Country unknown |
XY | Country not applicable |
Notes: The 'XX' code should be used when no 'Country of Origin'
information is provided. The 'XY' code should be used for non-specific collection
localities, eg. Africa, South East Asia.
Description: World Geographical Scheme for Recording Plant
Distributions by S. Hollis and R.K. Brummitt. - Plant Taxonomic Database Standards No. 2,
Version 1.0 (1992).
Domain/Range/Values: The contents of this field must be a valid entry from the above publication.
Comments:
1. This code contains up to 5 characters when taken to the complete Level 4 Geographical Scheme.
2. Every code is unique, so that the Level 1, 2 and 3 codes must also be
recognised if the complete Level 4 code is not provided.
Description: The primary recording unit which is the highest
order subdivision recognised by the Country of Origin.
Relevant standards: ITF; Hollis & Brummitt (1992) Complete
4-level Geographical scheme (refer Table 4 in Hollis & Brummitt, 1992).
Domain/Range/Values: Alpha; in full or standard abbreviation
accepted by or agreeing with the Hollis & Brummitt (1992) standard full Complete
4-level Geographical area.
Comments:
1. The entry in the field should preferably be a valid entry as defined by Table 4 (Hollis & Brummitt 1992).
2. If the entry is not part of the Hollis & Brummitt (1992) standard, then it must be equivalent to the entries in this latter standard. For example, this field is expected to contain State, Province, and other comparable geographical regions.
3. The abbreviations used for this field may be based on the official
(frequently political) abbreviations used within the Country of Origin, rather than
those of Hollis & Brummitt (1992) or the primary recording unit may be transferred in
full.
Description: The secondary recording unit which is the second highest-order subdivision of Country of Origin field.
TDWG Short name: BASICRECU (?), LOCALPOLU
Relevant standards: ABIS, ITF, TLR, WGSUB
Domain/Range/Values: Alpha; written in full or any valid regional
code or abbreviation (and then in uppercase) as used by the relevant country or region
Comments: This field contains the district or region from which
the specimen was collected, usually a subdivision of State or Province.
Description: The special geographic recording unit describes
specific conservation areas and other nature reserves of Country of Origin
field.
Relevant Standards: ABIS, ITF
Domain/Range/Values: Alphanumeric; written in full.
Comments: The field consists of the name of a defined
conservation area, such as national or state parks, forest reserves, nature reserves,
conservation or heritage parks.
TDWG Short name: LOCALITY, STANLOC (?)
Description: The locality where the plant was collected within
the country and subdivisions assigned in the previous three fields.
Relevant standards: ABIS, ITF
Domain/Range/Values: Alphanumeric; free text, plain
language description of the locality, as on the specimen label.
Comments: Where the locality covers more than one country, eg.
'Himalayas', and the Country Of Origin is unknown, an entry in the Locality
field may be used in conjunction with the value 'XX' (in ISO code for Country of Origin
field) and UNKNOWN (in the Country of Origin field).
TDWG Short name: ELEVATIONL
Description: The altitude of the collection locality or if the
collection has been made over an altitudinal range, then the minimum altitude of
the collection locality (cf. Maximum Altitude field), in metres above or below sea
level (cf. Depth field).
Relevant standards: SDTS, ITRF, AHD71, ABIS, ITF
Domain/Range/Values: Real; any geographically reasonable
altitude in metres.
Comments: Altitudes in feet must be converted to metres before
data are interchanged.
Negative values indicate terrestrial altitudes below sea level
(depressions), not aquatic environments or caves (refer Depth field below). A
negative altitude must be preceded by a minus sign, without a space. The plus sign for
positive altitudes should be omitted.
If the Altitude is unknown, then this field should not be filled.
TDWG Short name: ELEVLACCUR
Description: The estimated accuracy of the altitude or, when a
range of altitudes given, then the estimated accuracy of the minimum altitude, in metres.
Relevant standards: SDTS, ITRF, ITF
Domain/Range/Values: Real; in metres. If degree of
accuracy is unknown, then this field should not be filled.
Comments: Refer to Comments: of the Altitude field.
The two fields Accuracy of Altitude and Accuracy of Maximum
Altitude (refer below) are given to record the accuracy of the altitude geocodes when
a collection is made over an altitudinal range. The Accuracy of Altitude field
refers to the accuracy of the value recorded for the lower Altitude field, and Accuracy
of Maximum Altitude applies to the value in Maximum Altitude field. If the
collection altitude only refers to one value, then only Altitude field and the Accuracy
of Altitude should be filled.
Examples: If a collection was made from several plants growing on
a mountain side, then Altitude field refers to the lowest altitude, and Maximum
Altitude field to the highest altitude. The collector may have a very accurate
altitude reading for the lowest position, but only a coarse approximation for the upper
range. Therefore the accuracy value in the Accuracy of Altitude field would be
different from that recorded in the Accuracy of Maximum Altitude field. By filling
out the two Altitude fields, the data receiver knows that the specimens were collected
over a spectrum of plant material.
Altitude | 100 | Material collected from several plants with an accurate |
Accuracy of Altitude | 5 | lower altitudinal reading, but with the upper altitudinal |
Maximum Altitude | 250 | limit anywhere between 225 and 275 metres. |
Accuracy of Maximum Altitude | 25 |
Another example is when the collection was from only one plant source,
for which there is an inaccurate altitude reading.
Altitude | 1000 | This plant was collected at an altitude anywhere |
Accuracy of Altitude | 100 | between 900 and 1100 metres. |
Note: if the Accuracy of Altitude field is omitted, then
it should be assumed that the level of accuracy is not known.
TDWG Short name: ELEVATIONH
Description: The maximum altitude when the collection is cited as
having been collected over an altitudinal range, in metres above or below sea level (cf. Depth
field).
Relevant standards: SDTS, ITRF, AHD71, ABIS, ITF
Domain/Range/Values: Real; any geographically reasonable
altitude in metres.
Comments: Altitudes in feet should be converted to metres before
data are interchange. Negative values indicate terrestrial altitudes below sea level
(depressions), not aquatic environments or caves (refer Depth field below). A
negative altitude must be preceded by a minus sign, without a space. The plus sign for
positive altitudes should be omitted.
TDWG Short name: ELEVHACCUR
Description: The estimated accuracy of the maximum
altitude when the collection is cited as being taken from within an altitudinal range, in
metres.
Relevant standards: SDTS, ITRF, ITF
Domain/Range/Values: Real; in metres. If degree of
accuracy is unknown, then this field should not be filled.
Comments: Refer to Comments of the Altitude field
and Accuracy of Altitude field (above).
Note: If the Accuracy of Altitude and/or the Accuracy
of Maximum Altitude fields are omitted, then it should be assumed that the level of
accuracy is not known.
Description: Flag indicating the source of the altitude and
precision calculations.
Domain/Range/Values: Alpha; any valid entry as listed in the
following table:
Values in Field
collector
compiler
automatically generated.
Comments: The altitudes and altitude precisions provided by the
plant collector are usually from GPS readings, maps on-site, extracted from the field book
or from the herbarium label. Those provided by compilers other than the collector, are
based on the locality stated in the field book or on the herbarium label. Automatically
generated altitudes and altitude precisions are produced by various computer programs (eg.
GIS, DEM).
Description: This field indicates how the altitude was derived.
Domain/Range/Values: Alpha; any valid entry as listed in the
following table:
Values in Field Meaning
Altimeter | |
DEM | Digital Elevation Model |
GPS | Global Positioning System |
Field Estimate | |
Map | |
Unknown |
Comments: Although this field may be coded in institutional
databases, the full word or phrase should be used when interchanging data.
Description: The depth of the collection locality beneath the
water surface or below the ground surface, in metres.
Relevant standards: SDTS, ITRF, AHD, ABIS, ITF
Domain/Range/Values: Real, any geographically reasonable depth,
in metres.
Comments: Depth in feet and fathoms must be converted to metres
before transfer.
Depth below ground surface would be used to indicate the depth of a
collection made from within a terrestrial cave.
As with the altitude fields (namely Altitude and Maximum
Altitude fields), a duplicate field may be necessary to indicate a range of depths, or
the accuracy of measurement; refer Maximum Depth and Accuracy of Maximum Depth
(below).
Description: The accuracy of the depth estimation, or when a
range of depths are given, then the accuracy of the minimum depth estimation, in metres.
Relevant standards: SDTS, ITRF
Domain/Range/Values: Real; in metres. If degree of
accuracy is unknown, then this field should not be filled.
Comments: If the Accuracy of Depth field is omitted, then
it should be assumed that the level of accuracy is not known.
Description: The maximum depth when the collection is cited as
being taken from a range of depths, in metres beneath the water surface or below the
ground surface.
Relevant standards: SDTS, ITRF, AHD, ABIS, ITF
Domain/Range/Values: Real; any geographically reasonable
depth in metres.
Comments: Depth in feet and fathoms should be converted to metres
before transfer.
Description: The accuracy of the maximum depth estimation when
the collection is cited as being taken from a range of depths, in metres.
Relevant standards: SDTS, ITRF
Domain/Range/Values: Real; in metres. If degree of
accuracy is unknown, then this field should not be filled.
Comments: If the Accuracy of Depth and/or the Accuracy
of Maximum Depth fields are omitted, then it should be assumed that the level of
accuracy is not known
TDWG Short name: LATDEGH, LATDEGH
Description: The degrees of latitude of the collection locality,
as quoted from the herbarium label or derived.
Relevant standards: ABIS, ITF, AUSLIG Master Name File,
Gazetteers
Domain/Range/Values: Integer; within the range 0 � 90, any valid
and biogeographically meaningful latitude in degrees.
Comments:
1. If the latitude is not known, then this and the following latitude fields must be left unfilled.
3. If this field is filled, then the last latitude field (Latitude, Direction) must consist of one of the letters 'N' or 'S' (for North or South).
4. The geocode information should be interchanged as latitude and longitude in degrees, minutes, seconds and direction. Decimal degrees must be converted to degrees, minutes and seconds before the data are interchanged.
5. Grid references should be converted to degrees, minutes,
seconds and direction before data are interchanged.
Notes: The ABIS standard indicates a single 7�character field,
the first two of which are degrees, the second two minutes, the third two seconds and last
one direction. This standard is not followed in HISPID3.
To indicate a range of latitudes and longitudes, a duplicate set of
latitude and longitude fields will be required.
When this field is selected, then the Longitude fields must be
used, not the Spatial Grid fields.
TDWG Short name: LATMINH, LATMINL
Description: The minutes of latitude of the collection locality,
as quoted from the label or derived.
Relevant standards: ABIS, ITF
Domain/Range/Values: Integer; 0 � 59, any valid and
biogeographically meaningful latitude in minutes.
Comments: See Comment under Latitude, Degrees.
1. | If the latitude degrees (Latitude, Degrees field) is not known, then this and the following latitude fields must be left unfilled. |
2. | If the latitude minutes (Latitude, Minutes field) is not known, then this and latitude seconds (Latitude, Seconds Field) must be left unfilled. |
TDWG Short name: LATSECH, LATSECL
Description: The seconds of latitude of the collection locality,
as quoted from the label or derived.
Relevant standards: ABIS, ITF
Domain/Range/Values: Integer; 0 � 59, any valid and biogeographically
meaningful latitude in seconds.
Comments: See Comment under Latitude, Degrees.
If the value for this field is unknown, then this field must be
left unfilled.
TDWG Short name: LATDIRHIGH, LATDIRLOW
Description: The abbreviated direction of latitude of the
collection locality, relative to the equator, as quoted from the label or derived.
Relevant standards: ABIS, ITF
Domain/Range/Values: Alpha; N or S.
Comments: See Comment under Latitude, Degrees.
If Latitude, Degrees field is filled, then this field must
consist of one of the letters 'N' or 'S' (for North or South).
TDWG Short name: LONGDEGH, LONGDEGL
Description: The degrees of longitude of the collection locality,
as quoted from the label or derived.
Relevant standards: ABIS, ITF, AUSLIG Master Name File,
Gazetteers
Domain/Range/Values: Integer; 0 � 180, any valid and
biogeographically meaningful longitude in degrees.
Comments:
1. Exact location information for rare and/or endangered plants can be omitted from the transfer record by not transferring the seconds from the Latitude, Seconds and Longitude, Seconds fields for latitude and longitude, respectively or, for more conservationally sensitive plants, the data in the Latitude, Minutes and Longitude, Minutes fields need not be transferred.
2. If the longitude is not known, then this and the following longitude fields must be left unfilled.
3. If this field is filled, then the last longitude field (Longitude, Direction) must consist of one of the letters 'E' or 'W' (for East or West).
4. The geocode information should be interchanged as latitude and longitude in degrees, minutes, seconds and direction. Decimal degrees must be converted to degrees, minutes and seconds before the data are transferred.
5. Grid references should be converted to degrees, minutes,
seconds and direction before data are transferred.
To indicate a range of latitudes and longitudes, a duplicate set of
latitude and longitude fields will be required.
Notes: The ABIS standard indicates a single 8�character field,
the first three of which are degrees, the second two minutes, the third two seconds and
last one direction. This standard is not followed in HISPID3.
When this field is selected, then the Latitude fields must be
used, not the Spatial Grid fields.
TDWG Short name: LONGMINH, LONGMINL
Description: The minutes of longitude of the collection locality,
as quoted from the label or derived.
Relevant standards: ABIS, ITF
Domain/Range/Values: Integer; 0 � 59, any valid and
biogeographically meaningful longitude in minutes.
Comments: See Comment under Longitude, degrees.
1. If the longitude degrees (Longitude, Degrees field) is not known, then this and the following longitude fields must be left unfilled.
2. If the longitude minutes (Longitude, Minutes field) is not
known, then this and longitude seconds (Longitude, Seconds field) must be
left unfilled.
TDWG Short name: LONGSECH, LONGSECH
Description: The seconds of longitude of the collection, as
quoted from the label or derived.
Relevant standards: ABIS, ITF
Domain/Range/Values: Integer; 0 � 59, any valid and
biogeographically meaningful longitude in seconds.
Comments: See Comment under Longitude, Degrees.
If the value for this field is unknown, then this field must be
left unfilled.
TDWG Short name: LONGDIRHIGH, LONGDIRLOW
Description: The abbreviated direction of longitude of the
collection locality, relative to Greenwich, as quoted from the label or derived.
Relevant standards: ABIS, ITF
Domain/Range/Values: Alpha; E or W.
Comments: See Comment under Longitude, Degrees.
If the Longitude, Degrees field is filled, then this field must
consist of one of the letters 'E' or 'W' (for East or West, respectively).
Description: The projection type of the Map Grid system which is
used to determine the position of the locality from which the plant specimen was
collected.
Relevant standards: The default system is normally expected to be
ITRF or derivative standards (eg. MGA94, GDA94).
Domain/Range/Values: Alpha, internationally accepted codes (as
used in SDTS); the default system for HISPID3 is normally expected to be the Universal
Transverse Mercator Grid System (UTM). Wherever possible, the Eastings and Northings
should be converted to UTM or a derivative of it. For example, the MGA (Map Grid of
Australia) is a derivative of UTM and is derived from the projection of latitudes and
longitudes on the Australian Geodetic Datum (AGD) and Geocentric Datum of Australia (GDA).
Comments: In general, it is recommended that grid references be
converted to latitudes and longitudes for interchange (refer previous latitude and
longitude fields).
Description: The Map Grid Easting reference of the locality from
which the plant specimen was collected.
Relevant standards: ITRF or derivative standards (eg. MGA94,
GDA94).
Domain/Range/Values: Alphanumeric; any valid grid reference, in
metres. The Easting must consists of the following two elements:
Hemisphere Code values in Field | Meaning |
N | Northern Hemisphere Indicator |
S | Southern Hemisphere Indicator |
Note: This single letter code must preface the Easting.
Note: The complete Easting must always be cited as a six-digit integer
or to the level of accuracy recorded by truncation from the right.
An example of a complete Grid Easting reference would be S347000. An
example of an Easting to the nearest kilometre for the same locality would be S347.
Comments: In general, it is recommended that grid references be
converted to latitudes and longitudes for interchange (refer previous latitude and
longitude fields). When this field is selectred for transfer then Spatial Grid,
Northing must also be used, not the Latitude and Longitude fields.
Note: Grid Zone designation codes must not be used.
Description: The Map Grid Northing reference of the locality from
which the plant specimen was collected.
Relevant standards: ITRF or derivative standards (eg. MGA94,
GDA94).
Domain/Range/Values: Integer; any valid grid reference, in
metres. The Northing must consists of the following two elements:
Hemisphere Code values in Field | Meaning |
N | Northern Hemisphere Indicator |
S | Southern Hemisphere Indicator |
Note: This single letter code must preface the Northing.
Note: The complete Northing must always be cited as a seven-digit integer or to the level of accuracy recorded by truncation from the right.
An example of a complete Grid Northing reference would be S5739000. An
example of Grid Northing to the nearest kilometre for the same locality would be S5739.
Comments: In general, it is recommended that grid references be
converted to latitudes and longitudes for interchange (refer previous latitude and
longitude fields). When this field is selectred for transfer then Spatial Grid, Easting
must also be used, not the Latitude and Longitude fields.
Note: Grid Zone designation codes must not be used.
TDWG Short name: LATACCUR, LONGACCUR
Description: The precision of the latitude and longitude of the
record.
Relevant standards: SDTS, ABIS, ITF
Domain/Range/Values: Real; in metres.
Comments: If the latitude and longitude are not known, or the
accuracy is in doubt, then this field should be left unfilled and hence, not interchanged.
Description: Flag indicating the source of the geocode and
precision calculations.
Domain/Range/Values: Alpha; any value as listed in the following
table:
Values in Field
collector
compiler
generalised arbitrary point
automatically generated.
Comments: The geocodes provided by the plant 'collector' are
usually from GPS readings, maps on�site, extracted from field books or from the herbarium
label. Those provided by the database 'compiler' are derived from the locality information
provided by the collector. Computer-generated geocodes are either derived from a nearest
named place ('generalised arbitrary point') or from a stated locality.
TDWG Short name: STANLOC (?)
Description: The nearest named place to the locality of the
collection, 1:100 000 topographic map series.
Relevant standards: ABIS, AUSLIG Master Name File
Domain/Range/Values: Alpha; any valid place name on 1:100 000
topographic map series, conventional capitalisation of the first letter of place names.
Comments: Uncertainty with the application of this field to
historical material, reduces its usefulness. However individual institutions may choose to
use it as part of their core data and so make it available for interchange.
This group of fields describes the physical and environmental
characteristics of the locality in which the plant was collected as opposed to the
characteristics of the plant itself.
TDWG Short name: HABITAT
Description: Description of the habitat of the accession,
including the geology and soil type in which the plant grows, as well as the associated
species of the community from which this accession was collected.
Relevant standards: ITF
Domain/Range/Values: Alphanumeric; free text, any meaningful
habitat descriptions.
Comments: This information is usually provided by the original
collector.
This is an aggregate field, containing information that could be divided
among the following fields. In fact, many herbaria have entries for these segregate fields
in their field note books.
Since there are no universally accepted schemes for the classification
of soils, vegetation, landforms and substrates that modern collectors can be expected to
follow, the information in this field is regarded as free text. Furthermore, to translate
a collector's historical descriptions into modern schemes is prone to error and
misinterpretation.
Institutions with entirely or partially codified habitat data will have
to expand the codes prior to interchange.
Institutions with habitat data (as defined here) stored in discrete
fields must combine these fields prior to interchange if they are to use this field
in the transfer format.
TDWG Short name: GEOLOGY (?)
Description: A description of the topography of the habitat from
which the specimen was collected.
Domain/Range/Values: Alphanumeric; free text.
Comments: Refer Comments under Habitat.
Information in this field includes landform, situation, etc.
Description: The abbreviated aspect or outlook of the site from
which the plant was collected
Domain/Range/Values: Alpha; any valid directional or aspect
abbreviation.
Values in Field | Meaning |
N | North |
S | South |
E | East |
W | West |
also | NE, SE, NW, SW, NNE, ENE, ESE, SSE, NNW, WNW, WSW, SSW. |
also | Open Used to refer to a plain or ridge crest |
Closed Used to refer to a valley or ravine |
Comments: Refer Comments under Habitat.
Description: The substrate or parent rock material in the habitat
from which the specimen was collected.
Domain/Range/Values: Alpha; free text.
Comments: Refer Comments under Habitat.
This field should not include descriptions of soil type.
TDWG Short name: SOILS
Description: Description of the surface soil type from which the
specimen was collected.
Domain/Range/Values: Alphanumeric; free text.
Comments: Refer Comments under Habitat.
In many cases it is difficult to separate soil and substrate information
from a habitat description.
TDWG Short name: VEGETATION
Description: Description of the vegetation from which the
specimen was collected.
Domain/Range/Values: Alphanumeric; free text.
Comments: Refer Comments under Habitat.
The contents of this field are sometime inseparable from the contents of
the next field, Associated Species.
Description: A list of associated species found in the same habitat as
the collected specimen.
Domain/Range/Values: Alpha; free text, scientific names (with
standard Capitalisation) or non-scientific names.
Comments: In most herbaria, this field is combined with the
previous field as part of the vegetation description; with historical material it is
sometimes difficult to separate these two fields.
Refer Comments under Habitat and Vegetation.
This group of fields deals with all the descriptive and coded
information that describes the collector's names, field numbers, and dates of collection.
It does not cover
descriptive information about the plant itself nor habitat information (refer previous and
following groups).
Where relevant, all of the standard HISPID3 fields in this group refer
to the original wild source collection information (refer LOCATION GROUP, above for
further details).
If the current accession was taken from a secondary source (eg.
cultivated material, of known or unknown wild source), then the relevant field identifiers
would all be prefaced by the word 'Subsequent' and the relevant Transfer Codes would be
prefaced by a lowercase 's'. For example, the field which contains the information about
the collector's name of the current accession which was taken from cultivated material
would be known as Subsequent Collector's Name and the Transfer Code would be scnam.
The same Domain/Range/Values and Comments apply for these 'Subsequent'
fields as for the relevant 'primary' data fields.
TDWG Short name: COLLECTOR
Description: The name of the person or persons who made the
collection from the wild on which this record is based, and whose collection number is
cited in the next field (refer Collector's Identifier field).
Relevant standards: ABIS, ITF, TLR
Domain/Range/Values: Alpha; any valid collector's name, primary
collector's family name (surname) followed by comma and space (, ) then initials (all in
uppercase and each separated by fullstops). All initials and first letter of the
collector's family name in uppercase. For example, Chambers, P.F. For exceptions to this
format, refer Comments (below).
Comments: The collection number of the record (refer Collector's
Identifier) is regarded as being assigned by the primary collector of the material (as
cited in this field).
If more than one primary collector is associated with the collection
number(cf. Secondary Collector's Name field, below), then the names of these
collectors should be cited in this field, with the comma and space used to separate these
multiple collectors. For example, Tan, F., Jeffreys, R.S.
If necessary, the first and or other given names should be spelt out
when there is a known chance of confusion. For example, to distinguish between Wilson,
Paul G. and Wilson, Peter G. (with a space after the given name; no punctuation, except as
separator between two names, as described above).
If only one person collected the material from the wild, as represented
by this record, then the person's name must be entered only in this field.
Titles should be omitted.
If the family name (surname) consists of a preposition and a
substantive, as in many European names (eg. C.G.G.J. van Steenis), then the preposition is
in lowercase and the substantive has a Capital first letter. The remaining letters are in
lowercase. Names of this form should be transferred as follows:
cnam "Steenis, C.G.G.J. van",
Other examples of similar form include: de la Salle, d'Entrecasteaux,
van Royen. However, it is important to note that many of these names have been anglicised,
particularly in America, such that both parts of the family name are treated as the
substantive. In such examples, these names are to be transferred as follows:
cnam "De Nardi, J.C.",
The prefixes O', Mac' Mc' and M' (eg. MacDougal, McKenzie, O'Donnell)
should all be treated as part of the substantive and hence transferred as part of the
family name. For example:
cnam "McKenzie, V.",
Hyphenated given names should be tranferred as all uppercase, with the
first and last initial separated by a hyphen (without spaces), and only the last initial
terminated by a fullstop. For example:
cnam "Quirico, A-L.",
cnam "Peng, C-I.",
ABIS includes all collectors in one field in the format: surname, comma,
initials. This is not followed in the HISPID3 standard.
If the collector of the record is unknown, then this field should
contain the value 'Anonymous'.
Interpreted information should be enclosed in square brackets, eg.
Anonymous [? F. von Mueller]
The use of a personal herbarium is admissible here: eg. Anonymous (Herb.
J.M. Black).
TDWG Short name: COLLPREFIX, COLLNUMBER, COLLSUFFIX
Description: The sequential or other codified number given to the
specimen at the time of collection, by the primary collector(s), usually as on specimen
label.
Relevant standards: ABIS, ITF, TLR
Domain/Range/Values: Alphanumeric.
1. The Collector's Identifier may consist of any characters in the ASCII character subset.
2. If the Primary Collector's Name is unknown, then this field
would normally not be filled.
Comments:
If the Collector's Identifier is part of an institutional series,
then the institution's code should be included as part of the field number.
Collector's initials should not be included as part of the field number.
If a number or component is interpreted in any way, then the interpreted
part should be enclosed in brackets.
Care should be taken to avoid confusion with institutional collection
series and sheet numbers. Numbers assigned to the specimen after collection should not be
used.
If the collection number is not known, then this field should contain
the value 's.n.'
The proposed TDWG specimen standards include number prefixes and
suffixes. The interpretation of what constitutes these is likely to create more problems
than it solves, so the number is treated as a single unit in HISPID3.
The ABIS standards include a former collection number in this field but
this creates problems if the specimen has also been assigned its own field number.
TDWG Short name: COLLTEAM
Description: Other persons responsible for the collection (from
the wild) together with the primary collector of this record.
Relevant standards: ITF
Domain/Range/Values: Alpha; any valid collector's name, secondary
collector's family name (surname) followed by comma and space (, ) then initials (all in
uppercase and each separated by fullstops)(refer Primary Collector's Name field for
further details).
Comments: Refer Comments under Collector's Name.
Most commonly this field will not be filled, which implies a single
collector; it should not be filled if the Primary Collector's Name(s) field is not
filled.
If there are multiple secondary collectors, then the names of these
collectors should be cited in this field, with the comma and space used to separate these
multiple collectors. For example, Campbell, E.D., Lindley, S.A.
If necessary, the first and or other given names should be spelt out
when there is a known chance of confusion. For example, to distinguish between Wilson,
Paul G. and Wilson, Peter G. (with a space after the given name; no punctuation, except as
separator between two names, as described above).
Titles should be omitted.
Description: Amateur or casual collector who collected specimen
for primary collector.
Domain/Range/Values: Alpha; any valid collector's family name
(surname) followed by comma, then space and initials (refer Primary Collector's Name(s)
field).
TDWG Short name: COLLDATE
Description: The date on which the material was collected, as
represented by this record or, if a second collection date is provided (refer Second
Collection Date field below), then this field contains the earlier collection date.
Relevant standards: ABIS, ITF
Domain/Range/Values: Integer; any chronologically acceptable
date, year (4 digits) followed by month (2 digits) and then day (2 digits), without spaces
between each.
1. In this notation, leading zeroes must be included for months and
days, ie. January is coded as '01' not '1' and the 4th day is coded as '04' not '4'.
Example: | 19851109 | 9 November 1985 |
19510203 | 3 February 1951 |
2. If the day of the month is not known, then the last two digits should be omitted.
Example: March 1901 would preferably be transferred as 190103.
3. If the day and month are not known, the last four digits should be
omitted and just the 4 digit year information interchanged.
Note: The year is transferred as a full 4�digit number to
facilitate the use of the system in the next century, as well as to track verifications
from the previous century.
TDWG Short name: COLLDATE2
Description: The most recent date on which the material was
collected, as represented by this record, when a range of collection dates are provided
(refer Collection Date field above).
Relevant Standards: ABIS, ITF
Domain/Range/Values: Integer; any chronologically acceptable
date, year (4 digits) followed by month (2 digits) and then day (2 digits), without spaces
between each.
1. In this notation, leading zeroes must be included for months and
days, ie. January is coded as '01' not '1' and the 4th day is coded as '04' not '4'.
Example: | 19660419 | 19 April 1966 |
19451202 | 2 December 1945 |
2. If the day of the month is not known, then the last two digits should be omitted.
Example: June 1911 would preferably be transferred as 191106.
3. If the day and month are not known, the last four digits should be
omitted and just the 4 digit year information interchanged.
Notes: The year as a full 4�digit number to facilitate the use
of the system in the next century, as well as to track verifications from the previous
century.
Description: A field which allows the description of imprecise
collection dates which do not conform to the international 'Date' data standard.
Domain/Range/Values: Alpha-Integer; any chronologically
acceptable date which can not be converted to the format of the previous collection date
fields.
Comments: This field allows for the interchange of the following
types of collection date information:
For example:
'Spring 1912', 'late 1800's', 'end of 19th Century'
HISPID and ITF grouped these data into two fields (namely 'Kind of
Collection & Additional Components Flag' and 'Voucher Flag') with several categories
included in each. However, it may be preferable to consider separating each category into
distinct fields for transfer. This would readily enable unique identifiers (such as
institutional 'spirit' numbers and photographic numbers) to be transferred with each
category.
TDWG Short name: NATOBJECT (?)
Description: The kind of specimen�associated material
represented by this record number, such as sheet, packets, spirit, slides etc., not
propagating material.
Relevant standards: TLR
Domain/Range/Values:, Alphabetic; this field must consist of one
of the values in the table below.
Value of Field | Meaning |
Alcohol | Alcohol or any other fluid preserved material |
Bark | Bark sample |
Boxed | Boxed specimen |
Cytological | Cytological preparation |
Fruit | Fruit, carpological |
Illustration | Illustrations |
Image | Electronic image |
Other | Other |
Packet | Specimen stored in Packet |
Pollen | Pollen sample |
Negatives, black & white and colour photographic prints (including Cibachrome) | |
Reference | Reference herbarium |
Seed | Seed collection |
Sheet | Herbarium sheet |
Slide | Microscope slides |
Transparency | Transparencies, colour slides |
Vertical | Vertically filed, |
Wood | Wood sample |
Comments: The difficulty with this field for interchange is that
this information may only describe the attributes of the collection in one institution
(namely, the originating institution). It may not be an accurate description of the
interchange material, so care is needed in using this field as part of the transfer file
for exchange material.
Since a single collection may have more than one of the above
attributes, the relevant individual descriptor codes should be transferred in alphabetical
order, separated by a comma and a space. For example: if a collection consists of an
herbarium sheet, alcohol-preserved material, and a colour photographic print, then this
information would be transferred as Alcohol, Print, Sheet (note: each codes is
singular, not plural).
Description: A flag to indicate if the specimen serves as a
voucher for some special purpose.
Domain/Range/Values: Alphabetic; this field must consist of one
of the values in the table below:
Value of Field | Meaning |
Anatomical | anatomical |
Cytological | cytological |
DNA | DNA Studies |
Ecological | ecological |
Flora | Flora project |
Illustration | illustration |
Indigenous | indigenous uses, ethnobotany |
Living | living, including seed bank |
Other | palynological |
Photograph | photograph |
Phytochemical | phytochemical, pharmacological |
Unknown | voucher for unknown purpose |
Zoological | zoological |
Comments: The presence of these flags does not necessarily imply
the existence of supplementary material (eg. spirit, or slides) as described in the Kind
of Collection & Additional Components Flag field (above), although some may have
been prepared at some stage.
Since a single collection may be a voucher for more than one of the
above categories, the relevant individual descriptor codes should be transferred in
alphabetical order, separated by a comma and a space. For example: if a collection is a
voucher for the current 'Flora of Australia' project and for an ecological survey, then
this information would be transferred as Ecological, Flora (note: each code is
singular, not plural).
TDWG Short name: OBJECTS
Description: The number of herbarium sheets, packets, boxes,
etc., that make up the specimen represented by this record.
Domain/Range/Values: Integer; any reasonable number of parts.
Comments: This field is most useful for the control of loan
specimens that consist of multiple sheets or parts. It may not be so useful in other
interchange files because this information may only describe the attributes of the
collection in one institution (namely, the originating institution). It may not be an
accurate description of the interchange material, so care is needed in using this field as
part of the transfer file.
Description: A code indicating the presence of living material
for cultivation, collected at the time of collection of the specimen on which the record
is based.
Domain/Range/Values: Alphabetic; this field must consist of one
of the values in the table below:
Values in Field | Meaning |
Cutting | cuttings |
Division | division (of clumps etc.) |
Plant | plants (whole) |
Seed | seeds |
Comments: This field applies to the type of material gathered and
not to the source of material.
If this field is not filled then it can be assumed that either no
propagating material was collected or that the existence of propagating material was not
recorded.
The presence of a propagating material code does not necessarily imply
that live material is still in existence in cultivation.
As with the Kind Of Collection & Additional Components field,
if more than one type of material was collected for cultivation, then the relevant
individual descriptor codes should be transferred in alphabetical order, separated by a
comma and a space. For example: the information for a collection which consisted of
cuttings and seeds would be transferred as Cutting, Seed (Note: each code is
singular, not plural).
Description: A code to indicate the provenance of the accession
of living material represented by the herbarium voucher.
Domain/Range/Values: Alphabetic; this field must consist of one
of the values in the table below:
Values in Field | Meaning |
Cult. ex Wild | Propagule(s) from a wild source plant in cultivation |
Cult. non-wild | Accession not of wild source |
Unknown | Insufficient data to determine which of the above categories apply |
Wild | Accession of wild source |
Comments: The terms outlined above are defined as follows:
Cult. ex Wild |
Accessions derived by propagation directly from an original wild source plant. The method of propagation must be recorded in the Propagation History field. If the propagation is not directly from the original wild source plant, a complete history of the intermediate propagation steps must be known, otherwise the accession should be placed in the following category. |
Cult. non-Wild |
Accessions derived from cultivated plants where the immediate source plant does not have a propagation history that can be traced in detail to a wild plant. This category normally includes all cultivars. |
Unknown | Accessions where there is insufficient data or knowledge to know which of the three above categories applies. |
Wild | Accessions which originate from material collected in the wild. The accession has not been propagated further, except in the case of plants that may have been grown on from the original stock. The accession may have come directly from the wild, or from a botanic garden or gene bank acting as a distribution centre. Accessions in this category will usually have accompanying collection data, but the category also includes accessions which are known to be of direct wild origin but which do not have such additional data. |
Description: A code to indicate the nature of the production of
the living plant material vouched by the herbarium material, for use in association with
the previous field, Provenance Type Flag.
Relevant standards: ITF
Domain/Range/Values: One or two alphabetic letters, uppercase, as
designated below.
The entry must be one of the following values:
Values in Field | Meaning |
I | Individual wild plant(s) |
S | Seed or plant arising from seed (excluding apomixis) |
SA | From open pollination (from the wild) |
SB | From controlled pollination |
SC | From plants that are isolated and definitely self-pollinated |
V | Plant material derived asexually |
VA | From vegetative reproduction (including vegetative apomixis) |
VB | From apomictic cloning (agamospermy) |
U | Propagation history uncertain or no information |
Comments
1. | The second character is optional to provide more detailed information to be recorded. It is recommended that both characters are used wherever possible. |
2. | The value 'I' refers to complete individuals (or ramets) that have been removed from the wild, or to accessions which are growing naturally within the area of the establishment to which the record system applies. For example, this allows for individuals or groups of individual growing naturally (ie. not deliberately introduced) in reserve areas to receive full accession status. |
3. | Seed set by apomixis should be coded 'VB' rather than by any of the 'S' codes. |
4. | Most wild-collected seed will be the result of open pollination, and even taxa which are fully self-compatible will normally show a small amount of outbreeding. Only if it is absolutely certain that wild-collected seed was set as the result of selfing (eg. cleistogamy, controlled selfing) should the entry be set to 'SC'. Occasionally wild-collected seed will be the result of controlled experimental pollination, where the entry should be set to 'SB' (or 'SC' if selfed), but the majority of wild seed should be coded 'SA'. |
5. | Where material has been derived from cuttings, divisions, or other vegetative propagules (including material for micropropagation) of wild plants, the entry should be set to 'VA', and not 'I'. Such vegetative propagules may potentially differ slightly from the wild individual by somatic variation. |
6. | If the accession is of wild provenance (Provenance Type = Wild), then Propagation History cannot be 'U'. |
7. | If Propagation History is 'I' (individual wild plants), Provenance Type must be Wild. |
Description: A code to indicate the type of donor from which the accession was obtained.
Relevant standards: ITF
Domain/Range/Values: A single uppercase alphabetic letter, as
designated below:
1. The entry must consist of one of the following characters:
Values in Field | Meaning |
B | Botanic Garden or Arboretum |
E | Expedition |
G | Gene Bank |
H | Horticultural Association or Garden Club |
I | Individual |
M | Municipal Department |
N | Nursery or other commercial establishment |
O | Other |
R | Other research, field or experimental station |
S | Staff of institution to which record system applies |
V | University Department |
U | Unknown or not applicable |
2. If more than one individual descriptor code is applicable to this
record, then this information should be transferred in alphabetical order, without spaces
or punctuation. For example: the information for a collection which was collected on an
expedition by a University Department would be transferred as EV (also refer Comments
below).
Comments: The ITF2 transfer format recommends that 'if more than
one entry applies (eg. a plant collected by the botanic garden staff on an expedition),
the highest entry in the table should be used. The ITF2 standard lists the above table in
the following order: E G B R S V H M N I O U.
The purpose of this field is to allow the inclusion of information about
the contents of the Donor Field. If the value for Donor Type Flag is O, then
the Donor field description (see below) should be worded so as to indicate the type
of donor.
Description: The person, institution or business from which the accession was obtained.
Relevant standards: ITF, Index Herbariorum
Domain/Range/Values: Alphanumeric; free text, use institutional code wherever possible.
Comments: Plant material may come to an institution from many
sources and in various ways. The information under these headings cannot be coded or fully
standardised. The following guidelines should be used wherever possible:
1. | Accessions obtained directly from the wild, usually received from the collector. The name of the collector (surname, comma, space, initials with full stops, and standard capitalisation) should be given first, followed by the name of the country or area to which the expedition was made; or if the expedition has its own title, eg. Sino-British Expedition to China, this should be followed by the name of the country or area. Abbreviations or truncations can be used as necessary. |
2. | Accessions obtained from other institutions, using standard Index Herbariorum codes, or in full if institution does not have such a code. |
3. | Accessions obtained from private individuals. The minimum information should be the person's name (surname, comma, space, initials with full stops, and standard capitalisation) and country. More detail can be added, such as town and province, if necessary to identify collector. |
4. | Accessions obtained from horticultural or specialist plant societies. The name of the society (truncated as necessary) followed by the name of the country in which the society is based. Avoid abbreviations where the meaning is not clear. |
5. | Accessions obtained from gene banks, urban parks, garden centres or commercial suppliers. The name of institution (truncated as necessary) followed by the name of the country in which the institution is based. |
Description: Used when a living accession is transferred from one
herbarium, garden or gene bank (or other institution that maintains a record system) to
another, this is the unique identifier from the previous institution's record system.
Relevant standards: ITF
Domain/Range/Values: Alphanumeric; the Donor's Accession
Identifier may consist of any characters in the ASCII characters. It must be prefaced by
the institutional code of the donating institution.
Comments: If the plant was originally collected by or for the
donating institution from the wild, or came from a source that did not have a record
system, then this field should not be filled.
Otherwise, the Donor's Accession Identifier should be a unique
set of characters that identifies each accession in the donor's record system. Or in the
case of multiple accessions of the same taxon from one collection site or multiple plants
derived from a single seed sowing, a single value for the Donor's Accession Identifier
field is permissible.
Notes: This field is not the Collector's identifier for
the accession; those data are held under the Collector's Identifier field. It is
the donor's record system identifier. This identifier is often attached to the sheet in
the home institution and is not always present on donated or exchanged replicates.
This group of fields covers information about the plant itself,
generally those characters that will not be immediately obvious from the preserved
specimen.
TDWG Short name: NOTES
Description: This field includes descriptive information about
this plant record, including habit, shape and colour of vegetative and reproductive parts
of the plant.
Relevant standards: ITF
Domain/Range/Values: Alphanumeric; free text.
Comments: This information is usually provided by the collector.
As far as possible, this information should be transcribed verbatim from
the herbarium label.
Refer Comments under Locality.
Notes: This is an aggregate field, containing information that
could be divided among the following fields: Habit, Life form, Phenology. In
fact, many herbaria have entries for these segregate fields in their field notebooks.
Note: Information about flower colour is not interchanged as a separate field.
The Comments about encoding data under Habitat also apply
here. Institutions that encode and compartmentalise the information relevant to this field
will need to expand and combine it into this single Collection Note field prior to
interchange, if they wish to include this field in the transfer file.
TDWG Short name: FREQUENCY
Description: A description of the local abundance of the taxon
represented by the record, without any perceived conservation status implied or provided,
as recorded by the collector.
Domain/Range/Values: Alpha; free text.
Comments: Due to the lack of agreed standards for terms covering
abundance, the difficulty of interpreting historical material, and the fact that
statements of abundance are usually embedded in other descriptive text, it seems
preferable to combine abundance into a more general notes field (eg. Collection Notes).
However, since ITF2 maintains this information as distinct from the Collection Notes
field, this information is also included as a distinct field in HISPID3. However, ITF2
includes frequency assessment data in the Conservation Status (Threat) field.
Although the latter field is also available in HISPID3, it is recommended that the current
Frequency field, together with the three Plant Occurrence and Status Scheme
fields are used to transfer information describing frequency and perceived conservation.
status.
TDWG Short name: FREQUENCY
Description: A description of the local abundance, hence
perceived conservation status of the taxon represented by the specimen of this record in
the above habitat, as recorded by the collector.
Relevant standards: ITF
Domain/Range/Values: Alpha; free text.
Comments: Due to the lack of agreed standards for terms covering
abundance, the difficulty of interpreting historical material, and the fact that
statements of abundance are usually embedded in other descriptive text, it seems
preferable to combine abundance into a more general notes field (eg. Collection Notes).
However, since ITF2 maintains this information as distinct from the Collection Notes
field, this field is also included as a distinct field in HISPID3.
Description: This field records whether the plant is a native of
the collection habitat or whether it is a naturalised introduction.
Relevant standards: ITF
Domain/Range/Values: To be decided.
Comments: It is expected that this field will have values similar
to the following:
Values in Field
Natural
Naturalised
Unknown
Guidelines: World Conservation Monitoring Centre in Cambridge
(WCMC) are working on this standard, soon to be in press.
Description: This field records whether the plant occurs as a
cultivated specimen or not, in the collection habitat.
Relevant standards: ITF
Domain/Range/Values: To be decided.
Comments: This field records whether the plant is established or
not established (hence, only maintained as a cultivated plant), in the collection habitat.
It is expected that this field will have values similar to the following:
Values in Field
Cultivated
Not cultivated
Unknown
Guidelines: World Conservation Monitoring Centre in Cambridge
(WCMC) are working on this standard, soon to be in press.
Relevant standards: ITF
Domain/Range/Values: To be decided.
Comments: It is expected that this field will have values similar
to the following:
Values in Field
Human
Non-human
Unknown
Guidelines: World Conservation Monitoring Centre in Cambridge
(WCMC) are working on this standard, soon to be in press.
TDWG Short name: PLTDESCR
Description: A description of the habit or life form of the
specimen on which the record is based.
Domain/Range/Values: Alpha; free text, any valid description of a
plant habit.
Comments: Since there are no universally accepted schemes for the
classification of habit that modern collectors can be expected to follow, the information
in this field is regarded as free text. Furthermore, to interpolate a collector's
historical descriptions into modern schemes is prone to error and misinterpretation.
Description: The phenological state of the specimen represented
by this record.
Domain/Range/Values: Alpha; a value as listed in table below:
Values in Field
HIGHER PLANTS
'FLOWERS' (Pre-fertilisation)
bisexual flowers |
buds |
female cones |
female flowers |
flowers |
male/female cones |
male cones |
male flowers |
'FRUITS' (Post-fertilisation)
fruit |
fruiting cones |
CRYPTOGAMS
gametophyte |
sporophyte |
spore-bearing bodies |
GENERAL TERMS
fertile |
sterile |
leafless |
Comments: If more than one individual descriptor applicable to
this record, then this information should be transferred in alphabetical order, with each
descriptor separated by a comma and a space (, ) For example: the information for a
flowering, leafless collection would be transferred as:
phe "flowers, leafless",
Description: A single character indication of the presence of
additional data available on the specimen and not represented in this record.
Domain/Range/Values: Alpha; Y or N:
Values in Field | Meaning |
N | No additional data present |
Y | Additional data present |
Comments: The existence on the specimen label of extremely
detailed field notes or botanists' annotations and comments may be flagged in this field.
Description: Any additional information to be transferred
pertaining to the accession, but not catered for in the preceding fields.
Relevant standards: ITF
Domain/Range/Values: Alphanumeric; free text.
TDWG Short name: REPLICATES
Description: Number of replicate specimens represented by this
record or collection.
Domain/Range/Values: Integer.
Comments: A count of the replicate specimens indicated on the
field label, either explicitly or implicitly through the distribution list. This
information is probably not necessary for interchange, especially if the Replicates
Destination field is transferred (see below).
Description: The initial destination(s) of replicate specimens,
using Index Herbariorum codes.
Relevant standards: Index Herbariorum
Domain/Range/Values: Alpha; any valid Index Herbariorum code (in
uppercase), or name written in full if no code available, separated by comma and space.
Comments: The destinations in this field are the initial, not the
ultimate, destination. There is no reliable way of checking if and where donated specimens
may have been redirected.
This group of fields contains information pertaining to specimen loan
transactions. In a normalised database this group of fields fits very comfortably into a
separate linked table. Some institutions maintain this information in a separate database.
To reduce duplication of data entry effort and to facilitate monitoring
of specimens on loan, specimen data should be exchanged with the specimens going on loan.
Description: The unique institutional loan number applied with
the loan sequence number to uniquely identify a specimen on loan.
Domain/Range/Values: Alphanumeric; with or without other special
characters.
Comments: This can be a simple sequential number series or an
encoded arrangement involving the year and the loan number within the year. Institutions
that store a loan number as two separate fields will need to combine the fields prior to
interchange.
Used in association with the next field, Loan Sequence Number.
Description: The sequence of a specimen within a given loan,
assigned with the Loan Identification to uniquely identify a specimen on loan.
Domain/Range/Values: Integer; values starting at 1 and
sequential.
Comments: Used in association with the previous field, Loan
Identification.
Description: Institution to which the loan is being sent.
Relevant standards: Index Herbariorum
Domain/Range/Values: Alpha; any valid Index Herbariorum code (in
uppercase), or written in full if no code available.
Comments: Although this field is described here, the information
in this field should be included in the file identifier field Description of
File Contents and other Comments (p. 19).
Description: Name of botanist for whom the loan is destined.
Domain/Range/Values: Alpha; any valid botanist's name, with the
botanist's family name (surname) first, then comma and space, followed by initials (in
uppercase and each separated by fullstops), first letter of surname capitalised.
Comments: Although this field is described here, the information
in this field should be included in the file identifier field Description of
File Contents and other Comments (p. 19).
Description: The means by which the loan is being despatched from
the home institution.
Domain/Range/Values: Alpha.
surface mail |
airmail |
airfreight |
road |
rail |
courier |
safe hand |
insured/registered |
Comments: As with the previous fields, the information in this
field should be included in the file identifier field Description of File
Contents and other Comments (p. 19).
Description: The date the loan is prepared and/or sent
Domain/Range/Values: Integer; year (4 digits) followed by month
(2 digits) and then day (2 digits), without spaces between each. That is, YYYYMMDD. For
example, the 8th June 1975 would be transferred in the form 19750608 (refer Collection
Date for further details).
Comments: Although this field is described here, the information
in this field is equivalent to the information already included in Date of File field
(p. 15). Therefore, this information should be included in the latter file
identifier field.
Description: The date on which the loan is due to be returned to
the home institution.
Domain/Range/Values: Integer; year (4 digits) followed by month
(2 digits) and then day (2 digits), without spaces between each. That is, YYYYMMDD. For
example, the 4th February 1996 would be transferred in the form 19960204 (refer Collection
Date for further details).
Comments: This information can be either attached to every
interchange record or included in the file identifier field Description of File
Contents and other Comments (p. 19).
The fields in this group record house�keeping details of data entry and
modification and can be largely automated and transparent to the user.
It is possible and perhaps desirable to keep an in�house audit trail of
all modifications to the record and not just the last modification.
This group is important in the management of new data and data
corrections between institutions interchanging information. They provide a useful means of
tracing the sources of interpreted information and errors. They can also be used to avoid
the duplication of data entry.
TDWG Short name: CREATEBY
Description: Name or sign�on code of the person who created or
entered the initial data for this record.
Domain/Range/Values: Alphanumeric; any valid operator name or
code.
Comments: The use of an unique code here can serve as a link to
more detailed biographical data.
TDWG Short name: CREATEDATE
Description: Date of data creation or the initial entry of this
record in database.
Domain/Range/Values: Integer; year (4 digits) followed by month
(2 digits) and then day (2 digits), without spaces between each. That is, YYYYMMDD. For
example, the 22nd July 1987 would be transferred in the form 19870722 (refer Collection
Date for further details).
TDWG Short name: CREATEINST
Description: The institution where this record was created or
initially entered.
Domain/Range/Values: Alpha; any valid Index Herbariorum code.
Comments: Although this field is described here, this information
is often equivalent to the contents of the record identifier field Institution Code. In
these instances, this field need not be transferred. However, if the electronic record
was originally created at a third institution, then the code of this third institution
should be included here as it will be different to the entry in the Institution Code
field.
TDWG Short name: UPDATEBY
Description: Name or sign�on code of the last person to modify
or update data for this record.
Domain/Range/Values: Alphanumeric; any valid operator name or
code.
Comments: The use of an unique code here can serve as a link to
more detailed biographical data.
TDWG Short name: UPDATEDATE
Description: Date of the last modification or update of this
record.
Domain/Range/Values: Integer; year (4 digits) followed by month
(2 digits) and then day (2 digits), without spaces between each. That is, YYYYMMDD. For
example, the 14th October 1995 would be transferred in the form 19951014 (refer Collection
Date for further details).
TDWG Short name: UPDATEINST
Description: The institution where this record was last modified
or updated.
Domain/Range/Values: Alpha; uppercase, any valid Index
Herbariorum code.
Comments: Although this information is described here, the
contents of this field are equivalent to Institution Code.
This information would be very useful when institutions come to share
data and sort out multiple modifications to the same specimen information.
Transfer code: }
Description: The single character } indicating the end of a HISPID3 Record.
Domain/Range/Values: Must contain the symbol '}' only.
Comments: To be found at the end of each HISPID3 record
indicating the end of the data of a record, prior to beginning the next record or the 'endfile'
identifier if it is the last record in the transfer file.
Description: The end of the transfer file has the file identifier 'endfile' only.
Domain/Range/Values: Must contain the transfer code 'endfile' only (all in lowercase).
Comments: To be found at the very end of a HISPID3 file indicating the end of the file.