The GitHub site (https://github.com/salleuska/nimble-ness-2022) is the main repository for materials for the modules; you can also get the individual files from GitHub.
If you’re not familiar with Git, you can get these materials by simply going to https://github.com/salleuska/nimble-ness-2022 and click on the ‘Download ZIP’ button in the right side of the window or simply click here. See also slide 6 in this document for how to get them using Git or from within RStudio.
The short course will be organized in modules, each of which will be a combination of lecture/demo presentation.
Here are the modules we’ll work through for this short course.
I’ll present most of the material from within RStudio, using R Markdown documents with embedded R code. R Markdown is an extension to the Markdown markup language that makes it easy to write HTML in a simple plain text format. This allows us to both run the R/NIMBLE code directly as well as compile on-the-fly to an HTML file that can be used for presentation.
Warning: in some cases the processing of the R code in the R Markdown is screwy and the slides have error messages that do not occur if you just run the code directly in R or RStudio.